RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ZNF484Q5JVG2 852 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 ODR4Q5SWX8 454 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 SWSAP1Q6NVH7 229 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 ABHD15Q6UXT9 468 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 NIPA1Q7RTP0 329 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 RBM23Q86U06 439 aaKnown RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 CCDC60Q8IWA6 550 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 MICAL1Q8TDZ2 1067 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 NOC2LQ9Y3T9 749 aaKnown RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 PCDHB12Q9Y5F1 795 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 COL1A2P08123 1366 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 TTC3P53804 2025 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 TBKBP1A7MCY6 615 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 FAM86B1E9PN63 330 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 IPO5O00410 1097 aaKnown RBP14.75□□□□□ -0.05
SF3B3-202ENST00000562722 FAM86B2P0C5J1 330 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 CDC27P30260 824 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 NRIP1P48552 1158 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 CLK2P49760 499 aaKnown RBP14.75□□□□□ -0.05
SF3B3-202ENST00000562722 METAP2P50579 478 aaKnown RBP eCLIP14.75□□□□□ -0.05
SF3B3-202ENST00000562722 ADAM15Q13444 863 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 CAMK1Q14012 370 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 ADGRD2Q7Z7M1 963 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 SKAP1Q86WV1 359 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 CRIPAKQ8N1N5 446 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 METTL13Q8N6R0 699 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 ADAM2Q99965 735 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 ZNF577Q9BSK1 485 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 ERVK-5Q9HDB9 667 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 AAASQ9NRG9 546 aa14.75□□□□□ -0.05
SF3B3-202ENST00000562722 IGKV6D-21A0A0A0MT36 114 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 CCDC196A0A1B0GTZ2 297 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 GPR182O15218 404 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 MGEA5O60502 916 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 HMGB1P09429 215 aaKnown RBP14.74□□□□□ -0.05
SF3B3-202ENST00000562722 PFKFB3Q16875 520 aaPredicted RBP14.74□□□□□ -0.05
SF3B3-202ENST00000562722 KIZQ2M2Z5 673 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 THNSL1Q8IYQ7 743 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 KIAA0319LQ8IZA0 1049 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 REXO1Q8N1G1 1221 aaKnown RBP14.74□□□□□ -0.05
SF3B3-202ENST00000562722 EFHBQ8N7U6 833 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 CCDC12Q8WUD4 166 aaPredicted RBP14.74□□□□□ -0.05
SF3B3-202ENST00000562722 OSMRQ99650 979 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 CDHR5Q9HBB8 845 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 C6orf50Q9HD87 102 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 C1orf112Q9NSG2 853 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 MUTYHQ9UIF7 546 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 ST3GAL5Q9UNP4 418 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 SAMM50Q9Y512 469 aa14.74□□□□□ -0.05
SF3B3-202ENST00000562722 MYO7AQ13402 2215 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 CDC45O75419 566 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
SF3B3-202ENST00000562722 SETQ01105 290 aaPredicted RBP14.73□□□□□ -0.05
SF3B3-202ENST00000562722 AKAP17AQ02040 695 aaKnown RBP14.73□□□□□ -0.05
SF3B3-202ENST00000562722 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 SLC24A5Q71RS6 500 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 TMEM40Q8WWA1 233 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 TLE6Q9H808 572 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 ATP6V0A4Q9HBG4 840 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 RGS18Q9NS28 235 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 FAM217BQ9NTX9 383 aaPredicted RBP14.73□□□□□ -0.05
SF3B3-202ENST00000562722 TBC1D22BQ9NU19 505 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 PCDHGC5Q9Y5F6 944 aa14.73□□□□□ -0.05
SF3B3-202ENST00000562722 ATG2AQ2TAZ0 1938 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 IGLV3-22A0A075B6J6 115 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 DHX15O43143 795 aaKnown RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 C22orf31O95567 290 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 VTNP04004 478 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 PSAPP07602 524 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 CYP3A4P08684 503 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 CPA1P15085 419 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 CRYBB1P53674 252 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 RCAN1P53805 252 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 TSGA10IPQ3SY00 556 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 PRR16Q569H4 304 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 FAM102BQ5T8I3 360 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 MCTP2Q6DN12 878 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 FAM43BQ6ZT52 329 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 RNF135Q8IUD6 432 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 SMAP1Q8IYB5 467 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 BBXQ8WY36 941 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 TLR9Q9NR96 1032 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 GABBR1Q9UBS5 961 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 BARX2Q9UMQ3 279 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-202ENST00000562722 CEP131Q9UPN4 1083 aa14.72□□□□□ -0.05
SF3B3-202ENST00000562722 ZBTB42B2RXF5 422 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 PER2O15055 1255 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 FGF18O76093 207 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 FGFR1P11362 822 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 ATP4AP20648 1035 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 GNA11P29992 359 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 UBE3AQ05086 875 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 Q6ZUG5 572 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 CENPQQ7L2Z9 268 aaPredicted RBP14.71□□□□□ -0.05
SF3B3-202ENST00000562722 FAM228AQ86W67 206 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms