RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 SLC39A2Q9NP94 309 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 ZNF302Q9NR11 478 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 OLFML3Q9NRN5 406 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 SYNRGQ9UMZ2 1314 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 BECN2A8MW95 431 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 GOLGA6L19H0YKK7 550 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 TNPO2O14787 897 aaKnown RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 ADCY6O43306 1168 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 GH1P01241 217 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 ZNF865P0CJ78 1059 aaPredicted RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 SMPD1P17405 629 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 GAP43P17677 238 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 CCNE1P24864 410 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 TCF7P36402 384 aaPredicted RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 ADCYAP1R1P41586 468 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 NPEPPSP55786 919 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 LACTBP83111 547 aaPredicted RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 RAD51AP2Q09MP3 1159 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 PAK1Q13153 545 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 ACVR2BQ13705 512 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 CCL14Q16627 93 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 CENPPQ6IPU0 288 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 KLHL10Q6JEL2 608 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 SFR1Q86XK3 245 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 DHX37Q8IY37 1157 aaKnown RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 DUSP9Q99956 384 aaKnown RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 NIFKQ9BYG3 293 aaKnown RBP12.53□□□□□ -0.4
SNX1-212ENST00000560861 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 FANCLQ9NW38 375 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 MAPK8IP1Q9UQF2 711 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
SNX1-212ENST00000560861 PSMA7O14818 248 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 HIP1RO75146 1068 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 TBC1D8O95759 1140 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 OATP04181 439 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
SNX1-212ENST00000560861 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
SNX1-212ENST00000560861 ATP1A3P13637 1013 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 HOXD13P35453 343 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 ZNF75DP51815 510 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 CASP5P51878 434 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 FCGRTP55899 365 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 STX17P56962 302 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 LAMC2Q13753 1193 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 XKR9Q5GH70 373 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 HERC4Q5GLZ8 1057 aaPredicted RBP12.52□□□□□ -0.41
SNX1-212ENST00000560861 GJC2Q5T442 439 aaPredicted RBP12.52□□□□□ -0.41
SNX1-212ENST00000560861 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.41
SNX1-212ENST00000560861 IQSEC1Q6DN90 963 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 PLPPR4Q7Z2D5 763 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 APTXQ7Z2E3 356 aaKnown RBP12.52□□□□□ -0.41
SNX1-212ENST00000560861 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 P2RX5Q93086 422 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 STRA6Q9BX79 667 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 XPNPEP1Q9NQW7 623 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 RNF186Q9NXI6 227 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 COL4A3BPQ9Y5P4 624 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 SIP14410 1827 aa12.52□□□□□ -0.41
SNX1-212ENST00000560861 TRIM49BA6NDI0 452 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 NKRFO15226 690 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNX1-212ENST00000560861 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
SNX1-212ENST00000560861 TBCAO75347 108 aaKnown RBP12.51□□□□□ -0.41
SNX1-212ENST00000560861 PPP1R37O75864 691 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 ADCY5O95622 1261 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 CYP2B6P20813 491 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 PSMC4P43686 418 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 STAT5BP51692 787 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 STIM1Q13586 685 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 LRRC41Q15345 812 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 CCDC144BQ3MJ40 725 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 FAM160B1Q5W0V3 765 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 OTUD6AQ7L8S5 288 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
SNX1-212ENST00000560861 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 SH2D3AQ9BRG2 576 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 KCTD10Q9H3F6 313 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 PARVGQ9HBI0 331 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 POLD4Q9HCU8 107 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 CYP26B1Q9NR63 512 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
SNX1-212ENST00000560861 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
SNX1-212ENST00000560861 GNEQ9Y223 722 aaKnown RBP12.51□□□□□ -0.41
SNX1-212ENST00000560861 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
SNX1-212ENST00000560861 FAM13AO94988 1023 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms