RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 SP4Q02446 784 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 MTMR1Q13613 665 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 TRAPPC11Q7Z392 1133 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 FAM178BQ8IXR5 827 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 MTFR1LQ9H019 292 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 SMARCAL1Q9NZC9 954 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 SAR1BQ9Y6B6 198 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 PDXKO00764 312 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 CTNND1O60716 968 aaKnown RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 USO1O60763 962 aaKnown RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 EPHA7Q15375 998 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 UGCGQ16739 394 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 GLIPR1L2Q4G1C9 344 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 CC2D1AQ6P1N0 951 aaPredicted RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 ZC3H3Q8IXZ2 948 aaKnown RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 PACSIN1Q9BY11 444 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 GANQ9H2C0 597 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 SUGCTQ9HAC7 445 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 PPP1R9AQ9ULJ8 1098 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 MRPS25P82663 173 aaKnown RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 CAGE1Q8TC20 777 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 LPAR1Q92633 364 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 FIZ1Q96SL8 496 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 GPRC5CQ9NQ84 441 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 EHD2Q9NZN4 543 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 ADAMTS1Q9UHI8 967 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 TELO2Q9Y4R8 837 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 FRMPD4Q14CM0 1322 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 PDE2AO00408 941 aaPredicted RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 TRIM49P0CI25 452 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 TRIM49CP0CI26 452 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 EPB41P11171 864 aaKnown RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 PTPROQ16827 1216 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 WHAMMP3Q1A5X7 153 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 ASTE1Q2TB18 679 aaPredicted RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 SLC9C1Q4G0N8 1177 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 FOXR2Q6PJQ5 311 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 PADI6Q6TGC4 694 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 B3GNT9Q6UX72 402 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 DAW1Q8N136 415 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 KRT222Q8N1A0 295 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 PCIF1Q9H4Z3 704 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 AGO4Q9HCK5 861 aaKnown RBP11.59□□□□□ -0.55
TPM1-210ENST00000558264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.55
TPM1-210ENST00000558264 OLFML3Q9NRN5 406 aa11.59□□□□□ -0.55
TPM1-210ENST00000558264 A0A087X0T9 212 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 ZMYND10O75800 440 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 ZRANB2O95218 330 aaKnown RBP eCLIP11.58□□□□□ -0.56
TPM1-210ENST00000558264 FAM228BP0C875 321 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 GAP43P17677 238 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 PON1P27169 355 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 KLHL30Q0D2K2 578 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 BAATQ14032 418 aaPredicted RBP11.58□□□□□ -0.56
TPM1-210ENST00000558264 PGM5Q15124 567 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 EXOC3L4Q17RC7 722 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 RNF207Q6ZRF8 634 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 ZNF720Q7Z2F6 126 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 FRMD5Q7Z6J6 570 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 FAM186BQ8IYM0 893 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 SLC35C1Q96A29 364 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 IQCDQ96DY2 449 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 SPAG5Q96R06 1193 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 GCNT4Q9P109 453 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 FAM184BQ9ULE4 1060 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 RPTORQ8N122 1335 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 K7ENM7 598 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 VWA5AO00534 786 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 SERPING1P05155 500 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 UCHL3P15374 230 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 VSNL1P62760 191 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 MAPK7Q13164 816 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 BMS1Q14692 1282 aaKnown RBP11.58□□□□□ -0.56
TPM1-210ENST00000558264 ASIC2Q16515 512 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 BMT2Q1RMZ1 405 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 ARHGEF16Q5VV41 709 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 NFRKBQ6P4R8 1299 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 MCF2L2Q86YR7 1114 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 SYCP3Q8IZU3 236 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
TPM1-210ENST00000558264 COG1Q8WTW3 980 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 RIT2Q99578 217 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 RNF146Q9NTX7 359 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 GGA3Q9NZ52 723 aa11.58□□□□□ -0.56
TPM1-210ENST00000558264 ZBED4O75132 1171 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 TBC1D8O95759 1140 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 PTPRAP18433 802 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 RPS12P25398 132 aaKnown RBP11.57□□□□□ -0.56
TPM1-210ENST00000558264 RPL13P26373 211 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms