RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 GRK7Q8WTQ7 553 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 GOLPH3LQ9H4A5 285 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 HIP1RO75146 1068 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 TCP11X2Q5H9J9 407 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 MAP7D3Q8IWC1 876 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 SCN4BQ8IWT1 228 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 CTAGE3PQ8IX95 158 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 SAAL1Q96ER3 474 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 NUDT12Q9BQG2 462 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 MRPL4Q9BYD3 311 aaKnown RBP18.77■□□□□ 0.6
PTPN21-208ENST00000556564 SENP2Q9HC62 589 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 CLCN1P35523 988 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 PPFIA1Q13136 1202 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 ZNF699Q32M78 642 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 LRRC8AQ8IWT6 810 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 AKT1S1Q96B36 256 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 TRIM11Q96F44 468 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 FHDC1Q9C0D6 1143 aaPredicted RBP18.77■□□□□ 0.6
PTPN21-208ENST00000556564 XPAP23025 273 aaPredicted RBP18.77■□□□□ 0.59
PTPN21-208ENST00000556564 DYNLT1P63172 113 aa18.77■□□□□ 0.59
PTPN21-208ENST00000556564 EHHADHQ08426 723 aa18.77■□□□□ 0.59
PTPN21-208ENST00000556564 CCDC110Q8TBZ0 833 aa18.77■□□□□ 0.59
PTPN21-208ENST00000556564 GTF3C2Q8WUA4 911 aaPredicted RBP18.77■□□□□ 0.59
PTPN21-208ENST00000556564 SLC25A27O95847 323 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 SLC4A1P02730 911 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 NR3C1P04150 777 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 CPLX4Q7Z7G2 160 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 MAGED2Q9UNF1 606 aaPredicted RBP18.76■□□□□ 0.59
PTPN21-208ENST00000556564 PTPN22Q9Y2R2 807 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 NBPF12Q5TAG4 269 aaPredicted RBP18.76■□□□□ 0.59
PTPN21-208ENST00000556564 ELMOD1Q8N336 334 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 ERO1AQ96HE7 468 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 CEP63Q96MT8 703 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 RAB17Q9H0T7 212 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 ZNF148Q9UQR1 794 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 STK25O00506 426 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 GCLMP48507 274 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 CDO1Q16878 200 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 TAOK1Q7L7X3 1001 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 ZDHHC15Q96MV8 337 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 GBA2Q9HCG7 927 aaPredicted RBP18.76■□□□□ 0.59
PTPN21-208ENST00000556564 PFASO15067 1338 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 HDLBPQ00341 1268 aaKnown RBP18.76■□□□□ 0.59
PTPN21-208ENST00000556564 PRPSAP1Q14558 356 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 LLGL1Q15334 1064 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 NDST4Q9H3R1 872 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 IKBKBO14920 756 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 CAP2P40123 477 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 ANKS4BQ8N8V4 417 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 CCNYQ8ND76 341 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 SMC1BQ8NDV3 1235 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 DPH5Q9H2P9 285 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 SUCLA2Q9P2R7 463 aaPredicted RBP18.76■□□□□ 0.59
PTPN21-208ENST00000556564 CPSF3Q9UKF6 684 aaKnown RBP18.76■□□□□ 0.59
PTPN21-208ENST00000556564 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
PTPN21-208ENST00000556564 GIPC1O14908 333 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 HUS1O60921 280 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 ZNF18P17022 549 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 ECE1P42892 770 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 SKIV2LQ15477 1246 aaKnown RBP18.75■□□□□ 0.59
PTPN21-208ENST00000556564 MAP1SQ66K74 1059 aaPredicted RBP18.75■□□□□ 0.59
PTPN21-208ENST00000556564 INTS8Q75QN2 995 aaKnown RBP18.75■□□□□ 0.59
PTPN21-208ENST00000556564 RNF149Q8NC42 400 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 FBF1Q8TES7 1133 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 PIN4Q9Y237 131 aaKnown RBP18.75■□□□□ 0.59
PTPN21-208ENST00000556564 RARBP10826 455 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 FEZ2Q9UHY8 353 aaPredicted RBP18.75■□□□□ 0.59
PTPN21-208ENST00000556564 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 GUCY2FP51841 1108 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 KRT1P04264 644 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 JMJD4Q9H9V9 463 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 SGK1O00141 431 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 RIOK3O14730 519 aaKnown RBP18.75■□□□□ 0.59
PTPN21-208ENST00000556564 EPHA7Q15375 998 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 XXYLT1Q8NBI6 393 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 MRFAP1L1Q96HT8 127 aa18.75■□□□□ 0.59
PTPN21-208ENST00000556564 NR3C2P08235 984 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 KRT15P19012 456 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 DDR1Q08345 913 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 PAK2Q13177 524 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 TTC30AQ86WT1 665 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 KCTD6Q8NC69 237 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 TMEM143Q96AN5 459 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 PHLPP2Q6ZVD8 1323 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 VIMP08670 466 aaKnown RBP18.74■□□□□ 0.59
PTPN21-208ENST00000556564 ACER1Q8TDN7 264 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 UPP2O95045 317 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 TFRCP02786 760 aaKnown RBP18.74■□□□□ 0.59
PTPN21-208ENST00000556564 TSPY1Q01534 308 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 ORC2Q13416 577 aaPredicted RBP18.74■□□□□ 0.59
PTPN21-208ENST00000556564 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
PTPN21-208ENST00000556564 FAM205CA6NFA0 338 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 BNIP3LO60238 219 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 TUBBP07437 444 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 FAM76AQ8TAV0 307 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 SMC6Q96SB8 1091 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 SAT1P21673 171 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms