RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 DUPD1Q68J44 220 aa12.34□□□□□ -0.43
NRDE2-202ENST00000553409 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
NRDE2-202ENST00000553409 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
NRDE2-202ENST00000553409 KLHL29Q96CT2 875 aa12.34□□□□□ -0.43
NRDE2-202ENST00000553409 CEP63Q96MT8 703 aa12.34□□□□□ -0.43
NRDE2-202ENST00000553409 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
NRDE2-202ENST00000553409 STK38LQ9Y2H1 464 aa12.34□□□□□ -0.43
NRDE2-202ENST00000553409 KLRF2D3W0D1 207 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 UCHL3P15374 230 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 FOXR2Q6PJQ5 311 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 ERP44Q9BS26 406 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 ERVK-5Q9HDB9 667 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 FAM170AA1A519 330 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 UPP2O95045 317 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 H2AFZP0C0S5 128 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 DR1Q01658 176 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 GALNTL6Q49A17 601 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 H2AFVQ71UI9 128 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 FAM167BQ9BTA0 163 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 C6orf50Q9HD87 102 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 DAAM1Q9Y4D1 1078 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 FLOT1O75955 427 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 TDP2O95551 362 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 MARSP56192 900 aaKnown RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 ADAM9Q13443 819 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 SBK1Q52WX2 424 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 CNKSR1Q969H4 720 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 YIPF3Q9GZM5 350 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 NSRP1Q9H0G5 558 aaKnown RBP12.33□□□□□ -0.44
NRDE2-202ENST00000553409 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
NRDE2-202ENST00000553409 RREB1Q92766 1687 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 GNA14O95837 355 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 BRD2P25440 801 aaKnown RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 GNA11P29992 359 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ABL2P42684 1182 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 PTENP60484 403 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ICA1Q05084 483 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 LRRC14Q15048 493 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ANKRD20A2Q5SQ80 823 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ANKRD20A1Q5TYW2 823 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ANKRD20A3Q5VUR7 823 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ZDHHC24Q6UX98 284 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 MAEAQ7L5Y9 396 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 FGFR1OP2Q9NVK5 253 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 PNMA3Q9UL41 463 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 CORO1CQ9ULV4 474 aaPredicted RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 TRIM33Q9UPN9 1127 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 CASZ1Q86V15 1759 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 AGTP01019 485 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 PDE6CP51160 858 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 BLMHQ13867 455 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 CNGA2Q16280 664 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 GJA10Q969M2 543 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 AMFRQ9UKV5 643 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 USP15Q9Y4E8 981 aaPredicted RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 BZW2Q9Y6E2 419 aaKnown RBP12.32□□□□□ -0.44
NRDE2-202ENST00000553409 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
NRDE2-202ENST00000553409 EDIL3O43854 480 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 EVI5O60447 810 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 OAS1P00973 400 aaKnown RBP12.31□□□□□ -0.44
NRDE2-202ENST00000553409 PRDX5P30044 214 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 COPS2P61201 443 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 BNIP1Q12981 228 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 TMEM266Q2M3C6 531 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 ADAM22Q9P0K1 906 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.44
NRDE2-202ENST00000553409 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
NRDE2-202ENST00000553409 MSH2P43246 934 aa12.31□□□□□ -0.44
NRDE2-202ENST00000553409 ZNF211Q13398 564 aaPredicted RBP12.31□□□□□ -0.44
NRDE2-202ENST00000553409 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms