RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 VTA1Q9NP79 307 aa9.04□□□□□ -0.96
DEPDC4-207ENST00000549249 SLC9A2Q9UBY0 812 aa9.04□□□□□ -0.96
DEPDC4-207ENST00000549249 HOOK1Q9UJC3 728 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-207ENST00000549249 DDX41Q9UJV9 622 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-207ENST00000549249 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
DEPDC4-207ENST00000549249 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 GSTTP1A0A1W2PQM5 241 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 TNPO2O14787 897 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 ZNF862O60290 1169 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 RNF40O75150 1001 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 STBD1O95210 358 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 LYPLA2O95372 231 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 EYA4O95677 639 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 GGPS1O95749 300 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 P4HBP07237 508 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 SUPT20HL2P0C7V6 817 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 CYP11B2P19099 503 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 SFNP31947 248 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 PSMC4P43686 418 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 NLRP12P59046 1061 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 ACTR2P61160 394 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 SP4Q02446 784 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 HIC1Q14526 733 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 KMT5BQ4FZB7 885 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 ARSHQ5FYA8 562 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 GJC2Q5T442 439 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 CNNM4Q6P4Q7 775 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 ABHD15Q6UXT9 468 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 Q6ZNB5 142 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 SV2BQ7L1I2 683 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 CCDC60Q8IWA6 550 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 SYT2Q8N9I0 419 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 PIGOQ8TEQ8 1089 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 SOCS4Q8WXH5 440 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 DNAJC19Q96DA6 116 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 CCDC34Q96HJ3 373 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 GSDMAQ96QA5 445 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 PCYT2Q99447 389 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 ANO10Q9NW15 660 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 GABRQQ9UN88 632 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 IGSF9BQ9UPX0 1349 aa9.03□□□□□ -0.96
DEPDC4-207ENST00000549249 IGKV6D-21A0A0A0MT36 114 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 NPHP3-ACAD11A0A0J9YXS1 232 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 TMEM150BA6NC51 233 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 GPR37O15354 613 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 ADCY6O43306 1168 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SMC2O95347 1197 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 RPN1P04843 607 aaKnown RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 MYL1P05976 194 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 CYP2B6P20813 491 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 RGS2P41220 211 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 ADCYAP1R1P41586 468 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 QARSP47897 775 aaKnown RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 FCGRTP55899 365 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 PSMC5P62195 406 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 ASIC1P78348 528 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 ARHGAP1Q07960 439 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 NEDD9Q14511 834 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 TTLL4Q14679 1199 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 IQCB1Q15051 598 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 HSDL1Q3SXM5 330 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 PRAMEF19Q5SWL8 479 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 CELF3Q5SZQ8 465 aaKnown RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 OLFML2BQ68BL8 750 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 KCNV1Q6PIU1 500 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 METTL7BQ6UX53 244 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 DYMQ7RTS9 669 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SMAP1Q8IYB5 467 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SMYD4Q8IYR2 804 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 MSL3Q8N5Y2 521 aaKnown RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 TRIML1Q8N9V2 468 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SCFD2Q8WU76 684 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 RUSC1Q9BVN2 902 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 ZSWIM4Q9H7M6 989 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 CBX8Q9HC52 389 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SLC5A4Q9NY91 659 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 GABBR1Q9UBS5 961 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 TCEAL9Q9UHQ7 104 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 DNM3Q9UQ16 869 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 GDAQ9Y2T3 454 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 SAMM50Q9Y512 469 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 PCDHA10Q9Y5I2 948 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
DEPDC4-207ENST00000549249 GOLGA6L3A6NEY3 463 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 RSPH10B2B2RC85 870 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 PSAPP07602 524 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 RSPH10BP0C881 870 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 ZNF865P0CJ78 1059 aaPredicted RBP9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 TXNP10599 105 aaKnown RBP9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 ATP4AP20648 1035 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 CYP2C19P33261 490 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms