RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 RDM1Q8NG50 284 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 SLC5A5Q92911 643 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 LENG9Q96B70 501 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 MAP7D2Q96T17 732 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 LARP6Q9BRS8 491 aaKnown RBP10.58□□□□□ -0.72
YBX3-218ENST00000546298 C11orf84Q9BUA3 381 aaPredicted RBP10.58□□□□□ -0.72
YBX3-218ENST00000546298 GABBR1Q9UBS5 961 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 PADI3Q9ULW8 664 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 GINS2Q9Y248 185 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 DNAH12Q6ZR08 3092 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 ADGRA3Q8IWK6 1321 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 TANC1Q9C0D5 1861 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 C5orf67F2Z3F1 127 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 NCK2O43639 380 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 RPS6KA5O75582 802 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 DGKIO75912 1065 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 C22orf31O95567 290 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 ATP4AP20648 1035 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 CYP3A7P24462 503 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 CTNNB1P35222 781 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 CRYBB1P53674 252 aaPredicted RBP10.57□□□□□ -0.72
YBX3-218ENST00000546298 TFF2Q03403 129 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 LRCH2Q5VUJ6 765 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 TRMT1LQ7Z2T5 733 aaKnown RBP10.57□□□□□ -0.72
YBX3-218ENST00000546298 RTN4RL1Q86UN2 441 aaPredicted RBP10.57□□□□□ -0.72
YBX3-218ENST00000546298 CMTR2Q8IYT2 770 aaKnown RBP10.57□□□□□ -0.72
YBX3-218ENST00000546298 WASF1Q92558 559 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 PLVAPQ9BX97 442 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 LMAN2LQ9H0V9 348 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 C1orf112Q9NSG2 853 aa10.57□□□□□ -0.72
YBX3-218ENST00000546298 TRIP12Q14669 1992 aaPredicted RBP10.57□□□□□ -0.72
YBX3-218ENST00000546298 CCDC194A0A1B0GVG4 234 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 DENND3A2RUS2 1198 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 ZBTB42B2RXF5 422 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 PFKFB2O60825 505 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 OATP04181 439 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 KCNQ1P51787 676 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 CDC42EP1Q00587 391 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 NAALADL2Q58DX5 795 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 MIER3Q7Z3K6 550 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 BANK1Q8NDB2 785 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 ZNF689Q96CS4 500 aaPredicted RBP10.56□□□□□ -0.72
YBX3-218ENST00000546298 NAP1L4Q99733 375 aaKnown RBP10.56□□□□□ -0.72
YBX3-218ENST00000546298 UBE2ZQ9H832 354 aaPredicted RBP10.56□□□□□ -0.72
YBX3-218ENST00000546298 ERVK-5Q9HDB9 667 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 NOC2LQ9Y3T9 749 aaKnown RBP10.56□□□□□ -0.72
YBX3-218ENST00000546298 PCDHB7Q9Y5E2 793 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 CUL9Q8IWT3 2517 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 MYH7BA7E2Y1 1941 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 STK36Q9NRP7 1315 aa10.56□□□□□ -0.72
YBX3-218ENST00000546298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 M0R2N6 131 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 CHMP2AO43633 222 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 EDIL3O43854 480 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 PSMD10O75832 226 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 TDP2O95551 362 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 SARSP49591 514 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 PRKCEQ02156 737 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 TBC1D8BQ0IIM8 1120 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 SCRN1Q12765 414 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 TMEM266Q2M3C6 531 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 PUS10Q3MIT2 529 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 XKR3Q5GH77 459 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 EFCAB12Q6NXP0 572 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 SLC24A5Q71RS6 500 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 LINC01599Q8WXQ3 324 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 CLP1Q92989 425 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 MBOAT7Q96N66 472 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 AIFM3Q96NN9 605 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 ADAM2Q99965 735 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 UNC45AQ9H3U1 944 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 NSUN3Q9H649 340 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 CDHR5Q9HBB8 845 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 RC3H2Q9HBD1 1191 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 RGS18Q9NS28 235 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 TPCN1Q9ULQ1 816 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 ST3GAL5Q9UNP4 418 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 AKT3Q9Y243 479 aa10.55□□□□□ -0.72
YBX3-218ENST00000546298 PRRC2BQ5JSZ5 2229 aaKnown RBP10.55□□□□□ -0.72
YBX3-218ENST00000546298 RBAK-RBAKDNI3L0D1 243 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 ZNF862O60290 1169 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 MARCH6O60337 910 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 DKC1O60832 514 aaKnown RBP eCLIP10.54□□□□□ -0.72
YBX3-218ENST00000546298 VTNP04004 478 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 CENPBP07199 599 aaPredicted RBP10.54□□□□□ -0.72
YBX3-218ENST00000546298 ZSCAN20P17040 1043 aaPredicted RBP10.54□□□□□ -0.72
YBX3-218ENST00000546298 KCNA5P22460 613 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 CLCN3P51790 818 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 AK2P54819 239 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
YBX3-218ENST00000546298 NPY5RQ15761 445 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 INF2Q27J81 1249 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 KIZQ2M2Z5 673 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms