RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 INPP4AQ96PE3 977 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 LSM14BQ9BX40 385 aaKnown RBP5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 FHDC1Q9C0D6 1143 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 PSTPIP2Q9H939 334 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 PLCB1Q9NQ66 1216 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 NENFQ9UMX5 172 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 TRAF3IP3Q9Y228 551 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 MYH4Q9Y623 1939 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 MYH10P35580 1976 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 A0A087X0T9 212 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 POTECB2RU33 542 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 BHMG1C9JSJ3 638 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GOLGA8KD6RF30 607 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 POLRMTO00411 1230 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 TBX3O15119 743 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MED24O75448 989 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM228BP0C875 321 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ZBTB48P10074 688 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MYBP10242 640 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ANXA13P27216 316 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 HOXD13P35453 343 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MMP14P50281 582 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 EIF6P56537 245 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 POLR2FP61218 127 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SKOR1P84550 965 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 DDR1Q08345 913 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 AP3B2Q13367 1082 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 PICALMQ13492 652 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 BMT2Q1RMZ1 405 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 QRICH1Q2TAL8 776 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 Q4G0T1 1027 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CFAP221Q4G0U5 840 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC27A3Q5K4L6 730 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 C10orf76Q5T2E6 689 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 EMC10Q5UCC4 262 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MCTP2Q6DN12 878 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 APOBEC3HQ6NTF7 200 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CDC42EP5Q6NZY7 148 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GBP6Q6ZN66 633 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 IRF2BP2Q7Z5L9 587 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 FRMD5Q7Z6J6 570 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GPBP1Q86WP2 473 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SLFN12Q8IYM2 578 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MREGQ8N565 214 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ANKRD13CQ8N6S4 541 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GOLGA6L1Q8N7Z2 621 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 EIF1ADQ8N9N8 165 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 TSEN2Q8NCE0 465 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM76AQ8TAV0 307 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ETNPPLQ8TBG4 499 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC16A10Q8TF71 515 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 DCAF4Q8WV16 495 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GJA10Q969M2 543 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 DRC1Q96MC2 740 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GDAP1L1Q96MZ0 367 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 P2RX7Q99572 595 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 DHX36Q9H2U1 1008 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 DNAJC18Q9H819 358 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 NLRC4Q9NPP4 1024 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 LUC7LQ9NQ29 371 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 RBM12Q9NTZ6 932 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SMARCAL1Q9NZC9 954 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 EHD2Q9NZN4 543 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 TMEM59LQ9UK28 342 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 KIAA1024Q9UPX6 916 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ADAMTSL1Q8N6G6 1762 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ANKRD31Q8N7Z5 1873 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 NRXN2Q9P2S2 1712 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 NPHP3-ACAD11A0A0J9YXS1 232 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 A0A0U1RQG5 324 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GOLGA6CA6NDK9 693 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 C6orf229H3BNL8 230 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MEIS2O14770 477 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 PPEF1O14829 653 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CETN3O15182 167 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 BUB1O43683 1085 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 OPA1O60313 960 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 PALMO75781 387 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GOLGA6DP0CG33 693 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SPATA31C1P0DKV0 1188 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 KLRC1P26715 233 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CXCR5P32302 372 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC16A2P36021 539 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 PRKCIP41743 596 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 IRAK1P51617 712 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 LSM11P83369 360 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC7A5Q01650 507 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 APBA1Q02410 837 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 KCNH2Q12809 1159 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 PPFIA1Q13136 1202 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ADAM9Q13443 819 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GIT2Q14161 759 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ASIC2Q16515 512 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 TDRD12Q587J7 1177 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 HERC4Q5GLZ8 1057 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CCDC181Q5TID7 509 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 C8orf74Q6P047 294 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 POTEEQ6S8J3 1075 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms