RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 DCAF16Q9NXF7 216 aa11.12□□□□□ -0.63
LRP6-205ENST00000540527 MTRRQ9UBK8 725 aa11.12□□□□□ -0.63
LRP6-205ENST00000540527 SOS1Q07889 1333 aaPredicted RBP11.11□□□□□ -0.63
LRP6-205ENST00000540527 HSPA4LO95757 839 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 ITGA4P13612 1032 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
LRP6-205ENST00000540527 RPIAP49247 311 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 KRT32Q14532 448 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 PDCD1Q15116 288 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 JMJD6Q6NYC1 403 aaPredicted RBP11.11□□□□□ -0.63
LRP6-205ENST00000540527 GALNTL5Q7Z4T8 443 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 ATG16L2Q8NAA4 619 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 PCDH19Q8TAB3 1148 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 ACAP3Q96P50 834 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
LRP6-205ENST00000540527 CYP4F11Q9HBI6 524 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 KRT82Q9NSB4 513 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 DIAPH3Q9NSV4 1193 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 LRFN1Q9P244 771 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 TUBD1Q9UJT1 453 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
LRP6-205ENST00000540527 ACKR2O00590 384 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 URI1O94763 535 aaPredicted RBP11.1□□□□□ -0.63
LRP6-205ENST00000540527 STARD3NLO95772 234 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 ECI1P42126 302 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 ITGA8P53708 1063 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 NNTQ13423 1086 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
LRP6-205ENST00000540527 ARHGEF25Q86VW2 580 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 MCATQ8IVS2 390 aaKnown RBP11.1□□□□□ -0.63
LRP6-205ENST00000540527 MGARPQ8TDB4 240 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 ADAMTS15Q8TE58 950 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 HTRA1Q92743 480 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 ITPKCQ96DU7 683 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 GHITMQ9H3K2 345 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 WDR35Q9P2L0 1181 aa11.1□□□□□ -0.63
LRP6-205ENST00000540527 ZHX1Q9UKY1 873 aaPredicted RBP11.1□□□□□ -0.63
LRP6-205ENST00000540527 FIGNL2A6NMB9 653 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 SYT5O00445 386 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 DOK2O60496 412 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 PLA2G6O60733 806 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 EOMESO95936 686 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
LRP6-205ENST00000540527 HNRNPLP14866 589 aaKnown RBP eCLIP11.09□□□□□ -0.63
LRP6-205ENST00000540527 MC4RP32245 332 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 SMAD3P84022 425 aaKnown RBP11.09□□□□□ -0.63
LRP6-205ENST00000540527 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
LRP6-205ENST00000540527 POU4F2Q12837 409 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 LRP8Q14114 963 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 SMAD2Q15796 467 aaKnown RBP11.09□□□□□ -0.63
LRP6-205ENST00000540527 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 PLA2G2CQ5R387 149 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 OTOP1Q7RTM1 612 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 COA7Q96BR5 231 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 MAELQ96JY0 434 aaKnown RBP11.09□□□□□ -0.63
LRP6-205ENST00000540527 PYM1Q9BRP8 204 aaKnown RBP11.09□□□□□ -0.63
LRP6-205ENST00000540527 CNPPD1Q9BV87 410 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 PHF20Q9BVI0 1012 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 GP6Q9HCN6 339 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 TBC1D29Q9UFV1 150 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 MKL2Q9ULH7 1088 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 SPO11Q9Y5K1 396 aa11.09□□□□□ -0.63
LRP6-205ENST00000540527 SHOXO15266 292 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 DAPK3O43293 454 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 HPDP32754 393 aaPredicted RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 TNNT3P45378 269 aaPredicted RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 PAK1Q13153 545 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 TRPC3Q13507 836 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 CUL4AQ13619 759 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 LIX1LQ8IVB5 337 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 THEMISQ8N1K5 641 aaPredicted RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 N4BP2L2Q92802 583 aaPredicted RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 RRP36Q96EU6 259 aaKnown RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 CCDC74BQ96LY2 380 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 STK33Q9BYT3 514 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 UNKQ9C0B0 810 aaKnown RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 ARHGAP39Q9C0H5 1083 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 PRDM5Q9NQX1 630 aaPredicted RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 ZSWIM5Q9P217 1185 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 TBK1Q9UHD2 729 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
LRP6-205ENST00000540527 VPS28Q9UK41 221 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 ITGB1BP2Q9UKP3 347 aa11.08□□□□□ -0.64
LRP6-205ENST00000540527 PRAMEF27A3QJZ7 478 aa11.07□□□□□ -0.64
LRP6-205ENST00000540527 DDX3XO00571 662 aaKnown RBP eCLIP11.07□□□□□ -0.64
LRP6-205ENST00000540527 KDM1AO60341 852 aa11.07□□□□□ -0.64
LRP6-205ENST00000540527 SGPL1O95470 568 aa11.07□□□□□ -0.64
LRP6-205ENST00000540527 GSNP06396 782 aa11.07□□□□□ -0.64
LRP6-205ENST00000540527 GBP1P32455 592 aa11.07□□□□□ -0.64
LRP6-205ENST00000540527 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms