RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 EDEM3Q9BZQ6 932 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 PGAP2Q9UHJ9 254 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ATAD5Q96QE3 1844 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 RBAK-RBAKDNI3L0D1 243 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 NR3C1P04150 777 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 TUBBP07437 444 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 CAPN2P17655 700 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 SLC18A3Q16572 532 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 EDRF1Q3B7T1 1238 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 MMGT1Q8N4V1 131 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 BCS1LQ9Y276 419 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 ESYT3A0FGR9 886 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 DDX39AO00148 427 aaKnown RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 TBCAO75347 108 aaKnown RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 AFPP02771 609 aaKnown RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 UCHL3P15374 230 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 TCP1P17987 556 aaKnown RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 PON1P27169 355 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 PLS1Q14651 629 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 RINT1Q6NUQ1 792 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 MYCT1Q8N699 235 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 SPAG5Q96R06 1193 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 FBXO28Q9NVF7 368 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 WRAP73Q9P2S5 460 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-214ENST00000540113 FAM184BQ9ULE4 1060 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 TRAF3IP3Q9Y228 551 aa12.63□□□□□ -0.39
C11orf54-214ENST00000540113 SHTN1A0MZ66 631 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 AGPSO00116 658 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 SLITRK3O94933 977 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 XRCC5P13010 732 aaKnown RBP12.62□□□□□ -0.39
C11orf54-214ENST00000540113 NAB2Q15742 525 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 ZSCAN26Q16670 478 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 EXOC3L4Q17RC7 722 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 SKIDA1Q1XH10 827 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 IQCEQ6IPM2 695 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 MAEAQ7L5Y9 396 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 TRMT1LQ7Z2T5 733 aaKnown RBP12.62□□□□□ -0.39
C11orf54-214ENST00000540113 IRF2BP2Q7Z5L9 587 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 ARP10275 920 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 PRLRP16471 622 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 PAFAH1B1P43034 410 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 TRADDQ15628 312 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 LRCH2Q5VUJ6 765 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 OTOP1Q7RTM1 612 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 OGFOD1Q8N543 542 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 AENQ8WTP8 325 aaKnown RBP12.62□□□□□ -0.39
C11orf54-214ENST00000540113 SYN2Q92777 582 aaPredicted RBP12.62□□□□□ -0.39
C11orf54-214ENST00000540113 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
C11orf54-214ENST00000540113 POLR3CQ9BUI4 534 aaPredicted RBP12.62□□□□□ -0.39
C11orf54-214ENST00000540113 AIPL1Q9NZN9 384 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 FER1L6Q2WGJ9 1857 aa12.62□□□□□ -0.39
C11orf54-214ENST00000540113 GRID2IPA4D2P6 1211 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 TGFB1I1O43294 461 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 CALUO43852 315 aaPredicted RBP12.61□□□□□ -0.39
C11orf54-214ENST00000540113 EYA4O95677 639 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 MCM3P25205 808 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 EPHA7Q15375 998 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 FKBP1CQ5VVH2 108 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 FRMD5Q7Z6J6 570 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 TSEN2Q8NCE0 465 aaKnown RBP12.61□□□□□ -0.39
C11orf54-214ENST00000540113 MTMR14Q8NCE2 650 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 ACBD3Q9H3P7 528 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 SIX2Q9NPC8 291 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 PDXKO00764 312 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 TBC1D12O60347 775 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 PSMD10O75832 226 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 FAM13AO94988 1023 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 GLI1P08151 1106 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 CAP2P40123 477 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 NOP2P46087 812 aaKnown RBP12.61□□□□□ -0.39
C11orf54-214ENST00000540113 TGFB2P61812 414 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 CCDC70Q6NSX1 233 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 BANK1Q8NDB2 785 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 SLC35C1Q96A29 364 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 SH2D3AQ9BRG2 576 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
C11orf54-214ENST00000540113 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
C11orf54-214ENST00000540113 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 ZNRF3Q9ULT6 936 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 ZMYM2Q9UBW7 1377 aa12.61□□□□□ -0.39
C11orf54-214ENST00000540113 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
C11orf54-214ENST00000540113 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 CYP2J2P51589 502 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 CXCL9Q07325 125 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 DGKZQ13574 1117 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 ZNF572Q7Z3I7 529 aaPredicted RBP12.6□□□□□ -0.39
C11orf54-214ENST00000540113 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
C11orf54-214ENST00000540113 MSL3Q8N5Y2 521 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms