RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 ZKSCAN3Q9BRR0 538 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 MRPL9Q9BYD2 267 aaKnown RBP6.44□□□□□ -1.38
CTSB-216ENST00000530290 CELF4Q9BZC1 486 aaKnown RBP6.44□□□□□ -1.38
CTSB-216ENST00000530290 TMEM117Q9H0C3 514 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 AGO3Q9H9G7 860 aaKnown RBP6.44□□□□□ -1.38
CTSB-216ENST00000530290 ATP6V0A4Q9HBG4 840 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 VAT1LQ9HCJ6 419 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 TMEM161AQ9NX61 479 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 TMEM260Q9NX78 707 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 MAD2L2Q9UI95 211 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 DOCK8Q8NF50 2099 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 CFAP47Q6ZTR5 3102 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 DMXL1Q9Y485 3027 aa6.44□□□□□ -1.38
CTSB-216ENST00000530290 TBKBP1A7MCY6 615 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 C2CD4DB7Z1M9 353 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 C9IYK1 514 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 SORBS3O60504 671 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 PPP1R11O60927 126 aaPredicted RBP6.43□□□□□ -1.38
CTSB-216ENST00000530290 RPS6KA5O75582 802 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 CSPG5O95196 566 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 BRD1O95696 1058 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 KCNA2P16389 499 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 PDE1AP54750 535 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 NMIQ13287 307 aaPredicted RBP6.43□□□□□ -1.38
CTSB-216ENST00000530290 MTMR1Q13613 665 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 ATAT1Q5SQI0 421 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 PLPP4Q5VZY2 271 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 ELMSAN1Q6PJG2 1045 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 OTOP3Q7RTS5 596 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 PLPPR4Q7Z2D5 763 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 FRMD5Q7Z6J6 570 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 HOMER1Q86YM7 354 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 ABI1Q8IZP0 508 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
CTSB-216ENST00000530290 VN1R2Q8NFZ6 395 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 SMARCC2Q8TAQ2 1214 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 GPKOWQ92917 476 aaPredicted RBP eCLIP6.43□□□□□ -1.38
CTSB-216ENST00000530290 ZNF558Q96NG5 402 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 SPZ1Q9BXG8 430 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 RHOBTB2Q9BYZ6 727 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 OSBPL7Q9BZF2 842 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 JPH1Q9HDC5 661 aaPredicted RBP6.43□□□□□ -1.38
CTSB-216ENST00000530290 CYP26B1Q9NR63 512 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 TSHZ2Q9NRE2 1034 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 RGS18Q9NS28 235 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 ZSWIM5Q9P217 1185 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 IGSF9Q9P2J2 1179 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 SEC63Q9UGP8 760 aaKnown RBP6.43□□□□□ -1.38
CTSB-216ENST00000530290 DUSP12Q9UNI6 340 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 HCFC2Q9Y5Z7 792 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 IRAK3Q9Y616 596 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 NFASCO94856 1347 aa6.43□□□□□ -1.38
CTSB-216ENST00000530290 MIA3Q5JRA6 1907 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 CHD8Q9HCK8 2581 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 PER2O15055 1255 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 EOMESO95936 686 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 PDGFBP01127 241 aaPredicted RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 INSRRP14616 1297 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 HOXB3P14651 431 aaPredicted RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 MARK3P27448 753 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 PDE4AP27815 886 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 KIF5BP33176 963 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 GNAQP50148 359 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 POLGP54098 1239 aaPredicted RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 ERVFC1P60507 584 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 SP4Q02446 784 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 TDGQ13569 410 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 ANGPT1Q15389 498 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 SEC23AQ15436 765 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 MARCH8Q5T0T0 291 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 CWF19L1Q69YN2 538 aaKnown RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 KCNT2Q6UVM3 1135 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 CYP26C1Q6V0L0 522 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 CCDC149Q6ZUS6 474 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 TMC7Q7Z402 723 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 RTN4RL1Q86UN2 441 aaPredicted RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 DTWD2Q8NBA8 298 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 OTUD7AQ8TE49 926 aaPredicted RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 NXPE3Q969Y0 559 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 PIGSQ96S52 555 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 LZTS2Q9BRK4 669 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 SDF4Q9BRK5 362 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 MTA3Q9BTC8 594 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 FAM49AQ9H0Q0 323 aaPredicted RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 POMKQ9H5K3 350 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 SFXN1Q9H9B4 322 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 ERVK-5Q9HDB9 667 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 DIAPH3Q9NSV4 1193 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 DLL3Q9NYJ7 618 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 SPG21Q9NZD8 308 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 DPP7Q9UHL4 492 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 DBR1Q9UK59 544 aaKnown RBP6.42□□□□□ -1.38
CTSB-216ENST00000530290 CEP131Q9UPN4 1083 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 PCDHGC5Q9Y5F6 944 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 PKD1L2Q7Z442 2459 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 WDR81Q562E7 1941 aa6.42□□□□□ -1.38
CTSB-216ENST00000530290 C2orf16Q68DN1 1984 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms