RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 WDR64B1ANS9 1081 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 MAP2K7O14733 419 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 POLR3GO15318 223 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 DHX15O43143 795 aaKnown RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 TXNP10599 105 aaKnown RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 ADKP55263 362 aaKnown RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 SPIRE1Q08AE8 756 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 ITGB3BPQ13352 177 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 IL17AQ16552 155 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 METTL7BQ6UX53 244 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 APTXQ7Z2E3 356 aaKnown RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 CEP112Q8N8E3 955 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 SLAIN1Q8ND83 568 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 RASSF8Q8NHQ8 419 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 CCDC51Q96ER9 411 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 KATNBL1Q9H079 304 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 MRPL44Q9H9J2 332 aaKnown RBP16.12■□□□□ 0.17
NR1H3-231ENST00000529540 SLC9A2Q9UBY0 812 aa16.12■□□□□ 0.17
NR1H3-231ENST00000529540 POTEMA6NI47 508 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 POLR2DO15514 142 aaKnown RBP16.11■□□□□ 0.17
NR1H3-231ENST00000529540 DKC1O60832 514 aaKnown RBP eCLIP16.11■□□□□ 0.17
NR1H3-231ENST00000529540 HMGCRP04035 888 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
NR1H3-231ENST00000529540 SPATA1Q5VX52 437 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 NCAPH2Q6IBW4 605 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 TAPT1Q6NXT6 567 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 CCDC62Q6P9F0 684 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 B3GNT9Q6UX72 402 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 MSANTD4Q8NCY6 345 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 EXOC4Q96A65 974 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 RAB21Q9UL25 225 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 ADGRG1Q9Y653 693 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 ITIH6Q6UXX5 1313 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 ATP9AO75110 1047 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 GRIN1Q05586 938 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 EPHA7Q15375 998 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 PTPN21Q16825 1174 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 LONRF2Q1L5Z9 754 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 DUSP28Q4G0W2 176 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 MIER3Q7Z3K6 550 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 CABP7Q86V35 215 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 SNX29Q8TEQ0 813 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 EMID1Q96A84 441 aaPredicted RBP16.11■□□□□ 0.17
NR1H3-231ENST00000529540 EPC1Q9H2F5 836 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 CUEDC2Q9H467 287 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 TUFT1Q9NNX1 390 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 FLRT1Q9NZU1 646 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 CDC23Q9UJX2 597 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 Q9Y3F1 56 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 TRIM17Q9Y577 477 aa16.11■□□□□ 0.17
NR1H3-231ENST00000529540 ADCY3O60266 1144 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-231ENST00000529540 GGPS1O95749 300 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 GH1P01241 217 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 AKR1A1P14550 325 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 RPA1P27694 616 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 CHMP4BP1P59074 171 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 KARSQ15046 597 aaKnown RBP16.1■□□□□ 0.17
NR1H3-231ENST00000529540 CCL14Q16627 93 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 CELF3Q5SZQ8 465 aaKnown RBP16.1■□□□□ 0.17
NR1H3-231ENST00000529540 CDKAL1Q5VV42 579 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 SH3RF1Q7Z6J0 888 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
NR1H3-231ENST00000529540 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 TRIB2Q92519 343 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 CTAGE1Q96RT6 745 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 POLR3CQ9BUI4 534 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-231ENST00000529540 UNC45AQ9H3U1 944 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 DISC1Q9NRI5 854 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 SAMSN1Q9NSI8 373 aaKnown RBP16.1■□□□□ 0.17
NR1H3-231ENST00000529540 FAM184BQ9ULE4 1060 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
NR1H3-231ENST00000529540 DOCK3Q8IZD9 2030 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 DDX39AO00148 427 aaKnown RBP16.09■□□□□ 0.17
NR1H3-231ENST00000529540 NOP56O00567 594 aaKnown RBP16.09■□□□□ 0.17
NR1H3-231ENST00000529540 KIF5CO60282 957 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 PSAPP07602 524 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 ZNF865P0CJ78 1059 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-231ENST00000529540 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 CUL4BQ13620 913 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 MIS18BP1Q6P0N0 1132 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 RAD9BQ6WBX8 426 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 EPSTI1Q96J88 318 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 DESI2Q9BSY9 194 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
NR1H3-231ENST00000529540 CHMP2AO43633 222 aa16.08■□□□□ 0.17
NR1H3-231ENST00000529540 MFAP3LO75121 409 aa16.08■□□□□ 0.17
NR1H3-231ENST00000529540 P4HBP07237 508 aaKnown RBP16.08■□□□□ 0.17
NR1H3-231ENST00000529540 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.17
NR1H3-231ENST00000529540 CTCFP49711 727 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms