RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 BANK1Q8NDB2 785 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 SEL1LQ9UBV2 794 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 C19orf81C9J6K1 198 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 ORC4O43929 436 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 GUCY2DQ02846 1103 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 COG2Q14746 738 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 CCDC38Q502W7 563 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 MCUQ8NE86 351 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 RABGGTAQ92696 567 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 STK25O00506 426 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SLC4A1P02730 911 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 RBL2Q08999 1139 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 LPAR1Q92633 364 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SMYD2Q9NRG4 433 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 GABBR1Q9UBS5 961 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 ZNF18P17022 549 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 JADE1Q6IE81 842 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 RNF10Q8N5U6 811 aaKnown RBP17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 PRR5LQ6MZQ0 368 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SWSAP1Q6NVH7 229 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 TOGARAM2Q6ZUX3 1019 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 NGRNQ9NPE2 291 aaKnown RBP17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 TLK1Q9UKI8 766 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SFI1A8K8P3 1242 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 IPO5O00410 1097 aaKnown RBP17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 ZNF699Q32M78 642 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SCN4BQ8IWT1 228 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 EFCC1Q9HA90 598 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 ALKQ9UM73 1620 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 DYNLT1P63172 113 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SPDYE1Q8NFV5 336 aaPredicted RBP17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 GTF3C2Q8WUA4 911 aaPredicted RBP17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 NUDCD1Q96RS6 583 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 LCMT1Q9UIC8 334 aa17.49■□□□□ 0.39
PCDHA3-201ENST00000522353 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 BNIP3LO60238 219 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 BASP1P80723 227 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 RHPN2Q8IUC4 686 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 TRIM42Q8IWZ5 723 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 RHOT2Q8IXI1 618 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PROM2Q8N271 834 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PBKQ96KB5 322 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PVALEFA0A1B0GWK0 134 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 POTEMA6NI47 508 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 POC1B-GALNT4F8VUJ3 575 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 ENTPD3O75355 529 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PPP2R3CQ969Q6 453 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 ZBED1O96006 694 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PHLDB3Q6NSJ2 640 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 LRRC31Q6UY01 552 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 ZNF579Q8NAF0 562 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 UHMK1Q8TAS1 419 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 PARK7Q99497 189 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 TEX13BQ9BXU2 312 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 MRPL4Q9BYD3 311 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 ELP3Q9H9T3 547 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 LRRC8CQ8TDW0 803 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 CHMP6Q96FZ7 201 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 DYDC2Q96IM9 177 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 BARHL2Q9NY43 387 aa17.48■□□□□ 0.39
PCDHA3-201ENST00000522353 GPC3P51654 580 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 USP11P51784 963 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 PPARDQ03181 441 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 SNAPC2Q13487 334 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 KYAT1Q16773 422 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 BARGINQ6ZT62 677 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 SFR1Q86XK3 245 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 NNMTP40261 264 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 LDHDQ86WU2 507 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 SLC35F6Q8N357 371 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 TTC25Q96NG3 672 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 PIDD1Q9HB75 910 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 CAPS2Q9BXY5 557 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 PCDHA10Q9Y5I2 948 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 EIF4A3P38919 411 aaKnown RBP17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 CDC42EP1Q00587 391 aa17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 NOP9Q86U38 636 aaKnown RBP17.47■□□□□ 0.39
PCDHA3-201ENST00000522353 GSG1L2A8MUP6 293 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 TXNDC9O14530 226 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 AKR1B1P15121 316 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 PSMA2P25787 234 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 TKFCQ3LXA3 575 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 RWDD4Q6NW29 188 aaKnown RBP17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 VCX3AQ9NNX9 186 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 ADGRB3O60242 1522 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 ARHGAP42A6NI28 874 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 PMLP29590 882 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 STX1BP61266 288 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms