RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 MEI1Q5TIA1 1274 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 RCSD1Q6JBY9 416 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 WDR59Q6PJI9 974 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 DDX42Q86XP3 938 aaKnown RBP eCLIP9.18□□□□□ -0.94
PCM1-212ENST00000519253 FUKQ8N0W3 1084 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 GDAP1Q8TB36 358 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 COA7Q96BR5 231 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 ROPN1BQ9BZX4 212 aaPredicted RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 ROPN1Q9HAT0 212 aaPredicted RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 DNAJC12Q9UKB3 198 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 NR3C1P04150 777 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 HMGB2P26583 209 aaKnown RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 BTDP43251 543 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 TRMT1LQ7Z2T5 733 aaKnown RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 LRRC47Q8N1G4 583 aaKnown RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 HPS3Q969F9 1004 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 TRIM11Q96F44 468 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 UIMC1Q96RL1 719 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 ERP44Q9BS26 406 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 RASSF10A6NK89 507 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 F8W031 263 aaPredicted RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 SPARCL1Q14515 664 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 TRMT10CQ7L0Y3 403 aaKnown RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 OTUD6AQ7L8S5 288 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 ZNF653Q96CK0 615 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 MTMR8Q96EF0 704 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 PABPC3Q9H361 631 aaKnown RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 UFL1O94874 794 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 UCHL3P15374 230 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 MFAP3P55082 362 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 CCDC89Q8N998 374 aa9.18□□□□□ -0.94
PCM1-212ENST00000519253 C1orf131Q8NDD1 294 aaKnown RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.18□□□□□ -0.94
PCM1-212ENST00000519253 PNMA6FA0A0J9YX94 578 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 FOXP2O15409 715 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 RFX1P22670 979 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 PMS1P54277 932 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 PPM1KQ8N3J5 372 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 LRRC37BQ96QE4 947 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 TCRBV5S4A2TA0A5A2 114 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 CLIC2O15247 247 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 HNRNPH3P31942 346 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 ODR4Q5SWX8 454 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 SCYL3Q8IZE3 742 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 TEX9Q8N6V9 391 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 FAM212AQ96EL1 285 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 FNBP1Q96RU3 617 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 DUSP9Q99956 384 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 FERMT1Q9BQL6 677 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 FAM129AQ9BZQ8 928 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 CARD9Q9H257 536 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 SYNCQ9H7C4 482 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 A0A087X0T9 212 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 STXBP3O00186 592 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 PDXKO00764 312 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 TRAPPC3O43617 180 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 FAM228BP0C875 321 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 GPC5P78333 572 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 CYP4A11Q02928 519 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 TMED2Q15363 201 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 TGS1Q96RS0 853 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 GGA1Q9UJY5 639 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 EXOC1LA0A1B0GW35 172 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 SLC26A4O43511 780 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 GAS7O60861 476 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 ABL1P00519 1130 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 APLFQ8IW19 511 aaPredicted RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 IQCKQ8N0W5 287 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.941e-7■■■□□ 16.9
PCM1-212ENST00000519253 CFAP61Q8NHU2 1237 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 PRMT1Q99873 361 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 LRRN2O75325 713 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 AOC3Q16853 763 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 PDCD7Q8N8D1 485 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 TRIM51Q9BSJ1 452 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 ZC3H12CQ9C0D7 883 aaKnown RBP9.17□□□□□ -0.94
PCM1-212ENST00000519253 RAB20Q9NX57 234 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 PXDNQ92626 1479 aa9.17□□□□□ -0.94
PCM1-212ENST00000519253 ZNF233A6NK53 670 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 E9PMD0 336 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 POC1B-GALNT4F8VUJ3 575 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 HNRNPCL1O60812 293 aaKnown RBP9.16□□□□□ -0.94
PCM1-212ENST00000519253 CA4P22748 312 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
PCM1-212ENST00000519253 CCDC137Q6PK04 289 aaKnown RBP9.16□□□□□ -0.94
PCM1-212ENST00000519253 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 GLYCTKQ8IVS8 523 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 ANKRD27Q96NW4 1050 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 TBK1Q9UHD2 729 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 TPX2Q9ULW0 747 aaKnown RBP9.16□□□□□ -0.94
PCM1-212ENST00000519253 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 MAPK4P31152 587 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 GALCP54803 685 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 BPIFB4P59827 614 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 MAP3K21Q5TCX8 1036 aa9.16□□□□□ -0.94
PCM1-212ENST00000519253 CYP4F22Q6NT55 531 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms