RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 CDC25AP30304 524 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 ZNF157P51786 506 aaPredicted RBP10.15□□□□□ -0.78
NR1I3-230ENST00000511944 FMR1Q06787 632 aaKnown RBP eCLIP10.15□□□□□ -0.78
NR1I3-230ENST00000511944 PSMD2Q13200 908 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 IQCB1Q15051 598 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 ZBTB33Q86T24 672 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.78
NR1I3-230ENST00000511944 CYP2W1Q8TAV3 490 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 MMP19Q99542 508 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
NR1I3-230ENST00000511944 PAGR1Q9BTK6 254 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 DNAJC25Q9H1X3 360 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 CBX8Q9HC52 389 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 TXNRD2Q9NNW7 524 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 PRM3Q9NNZ6 103 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 MAN1B1Q9UKM7 699 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 DNM3Q9UQ16 869 aa10.15□□□□□ -0.78
NR1I3-230ENST00000511944 TMEM88BA6NKF7 163 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 GOLGA6L19H0YKK7 550 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 GFRA3O60609 400 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 EYA4O95677 639 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 ALDH1A1P00352 501 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 RPN1P04843 607 aaKnown RBP10.14□□□□□ -0.79
NR1I3-230ENST00000511944 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
NR1I3-230ENST00000511944 SPATA31C1P0DKV0 1188 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 ARP10275 920 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 MYL5Q02045 173 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 STIM1Q13586 685 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 DPCR1Q3MIW9 517 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 ZNF658Q5TYW1 1059 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-230ENST00000511944 NCAPH2Q6IBW4 605 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 SARM1Q6SZW1 724 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 UNC13DQ70J99 1090 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 CATSPER3Q86XQ3 398 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
NR1I3-230ENST00000511944 SNIP1Q8TAD8 396 aaKnown RBP10.14□□□□□ -0.79
NR1I3-230ENST00000511944 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 NACC1Q96RE7 527 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 TIPINQ9BVW5 301 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 UNC45AQ9H3U1 944 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 SLC5A4Q9NY91 659 aa10.14□□□□□ -0.79
NR1I3-230ENST00000511944 SMCHD1A6NHR9 2005 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 SLC15A5A6NIM6 579 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 A6NJR5 290 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 POM121CA8CG34 1229 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 BECN2A8MW95 431 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 FOXN1O15353 648 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 KLRC4O43908 158 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 KIF20AO95235 890 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 MYCLP12524 364 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 KCNA2P16389 499 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 SMPD1P17405 629 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 GRM5P41594 1212 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 AFMP43652 599 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 UBXN2AP68543 259 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 ITGB3BPQ13352 177 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 NEDD9Q14511 834 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 MIER3Q7Z3K6 550 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 C4orf19Q8IY42 314 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 CYP4X1Q8N118 509 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 FAM43AQ8N2R8 423 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 SYT2Q8N9I0 419 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 ENOX1Q8TC92 643 aaKnown RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 ZNF526Q8TF50 670 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 CDK15Q96Q40 435 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 ZSWIM4Q9H7M6 989 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 EXOC1Q9NV70 894 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 SEL1LQ9UBV2 794 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 DBR1Q9UK59 544 aaKnown RBP10.13□□□□□ -0.79
NR1I3-230ENST00000511944 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 PPME1Q9Y570 386 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 LOXHD1Q8IVV2 1947 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 LRRC37A2A6NM11 1700 aa10.13□□□□□ -0.79
NR1I3-230ENST00000511944 ASTN1O14525 1302 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 LCTP09848 1927 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 FAM155AB1AL88 458 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-230ENST00000511944 MED24O75448 989 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 SLITRK3O94933 977 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 PLA2G4BP0C869 781 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 CYP2C8P10632 490 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 BMP6P22004 513 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 SCP2P22307 547 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 QARSP47897 775 aaKnown RBP10.12□□□□□ -0.79
NR1I3-230ENST00000511944 TM4SF4P48230 202 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 SLC12A3P55017 1021 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 ASIC1P78348 528 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 CNTN2Q02246 1040 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 EHHADHQ08426 723 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 NOGQ13253 232 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 CUL4BQ13620 913 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 GRB14Q14449 540 aa10.12□□□□□ -0.79
NR1I3-230ENST00000511944 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms