RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 ZBTB42B2RXF5 422 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 STBD1O95210 358 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 SPATA31C1P0DKV0 1188 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 TARBP2Q15633 366 aaKnown RBP17.87■□□□□ 0.45
SSBP1-214ENST00000498107 MTERF2Q49AM1 385 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 ANO5Q75V66 913 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 ZNF710Q8N1W2 664 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 NME8Q8N427 588 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 LINC00301Q8NCQ3 95 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 TRAPPC12Q8WVT3 735 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 CEP170P1Q96L14 293 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 FTOQ9C0B1 505 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSBP1-214ENST00000498107 CYP26B1Q9NR63 512 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 TFIP11Q9UBB9 837 aaKnown RBP17.87■□□□□ 0.45
SSBP1-214ENST00000498107 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
SSBP1-214ENST00000498107 SRPRBQ9Y5M8 271 aaKnown RBP17.87■□□□□ 0.45
SSBP1-214ENST00000498107 SPTLC2O15270 562 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 PPP6R2O75170 966 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 MED24O75448 989 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 SLC34A2O95436 690 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 C22orf31O95567 290 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 SELPP16109 830 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 MARCKSP29966 332 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 RFC2P35250 354 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 DDIT3P35638 169 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 THPOP40225 353 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 UBA7P41226 1012 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 KRT85P78386 507 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 XKR9Q5GH70 373 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 KRI1Q8N9T8 703 aaKnown RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 KCNG4Q8TDN1 519 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 SLC7A3Q8WY07 619 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 DHX38Q92620 1227 aaKnown RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 CDK5RAP3Q96JB5 506 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 NT5C3AQ9H0P0 336 aa17.86■□□□□ 0.45
SSBP1-214ENST00000498107 WRAP73Q9P2S5 460 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 RBM19Q9Y4C8 960 aaKnown RBP17.86■□□□□ 0.45
SSBP1-214ENST00000498107 M0QZ92 97 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 GAS2O43903 313 aaKnown RBP17.85■□□□□ 0.45
SSBP1-214ENST00000498107 CKBP12277 381 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 CYP2C18P33260 490 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 TXLNAP40222 546 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 RFC5P40937 340 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 DNM2P50570 870 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 DNM1Q05193 864 aaKnown RBP17.85■□□□□ 0.45
SSBP1-214ENST00000498107 FPGSQ05932 587 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 PPIGQ13427 754 aaKnown RBP eCLIP17.85■□□□□ 0.45
SSBP1-214ENST00000498107 TRIM71Q2Q1W2 868 aaKnown RBP17.85■□□□□ 0.45
SSBP1-214ENST00000498107 IER5Q5VY09 327 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 LRRC8DQ7L1W4 858 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 RPUSD2Q8IZ73 545 aaKnown RBP17.85■□□□□ 0.45
SSBP1-214ENST00000498107 METTL13Q8N6R0 699 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 BADQ92934 168 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 MAP7D2Q96T17 732 aa17.85■□□□□ 0.45
SSBP1-214ENST00000498107 DBR1Q9UK59 544 aaKnown RBP17.85■□□□□ 0.45
SSBP1-214ENST00000498107 RSPH10B2B2RC85 870 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 IQCF3P0C7M6 154 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 RSPH10BP0C881 870 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 POLGP54098 1239 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-214ENST00000498107 CDC42EP1Q00587 391 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 PRPF38BQ5VTL8 546 aaKnown RBP17.84■□□□□ 0.45
SSBP1-214ENST00000498107 PLA2G4FQ68DD2 849 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 EFCAB12Q6NXP0 572 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 RUFY4Q6ZNE9 571 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 FAM49AQ9H0Q0 323 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-214ENST00000498107 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 FBXO2Q9UK22 296 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-214ENST00000498107 KIAA1024Q9UPX6 916 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 DNM3Q9UQ16 869 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 LOXHD1Q8IVV2 1947 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 LTBP2Q14767 1821 aa17.84■□□□□ 0.45
SSBP1-214ENST00000498107 EVPLQ92817 2033 aa17.83■□□□□ 0.45
SSBP1-214ENST00000498107 PP2D1A8MPX8 630 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 MAFO75444 373 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-214ENST00000498107 DGAT1O75907 488 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 PFKMP08237 780 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
SSBP1-214ENST00000498107 ITGB8P26012 769 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 MAGEA10P43363 369 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-214ENST00000498107 CCL23P55773 120 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 NPEPPSP55786 919 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 MDM2Q00987 491 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-214ENST00000498107 FAM26DQ5JW98 314 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 HYIQ5T013 277 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 ZNF618Q5T7W0 954 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 POTEGQ6S5H5 508 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 CABP7Q86V35 215 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 PIGOQ8TEQ8 1089 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 WNT8BQ93098 351 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-214ENST00000498107 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 WNT8AQ9H1J5 351 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 SUGCTQ9HAC7 445 aa17.83■□□□□ 0.44
SSBP1-214ENST00000498107 DDX19AQ9NUU7 478 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms