RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 RPF1Q9H9Y2 349 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 RRN3P2A6NIE6 340 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 CLDN3O15551 220 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■□□□ 11.5
GAPVD1-219ENST00000495955 COASYQ13057 564 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 P2RX5Q93086 422 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 ATP11BQ9Y2G3 1177 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 DCDC2CA8MYV0 355 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 FAM86B1E9PN63 330 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 FAM86B2P0C5J1 330 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 CD19P15391 556 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 PSMC2P35998 433 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 FANCCQ00597 558 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF568Q3ZCX4 644 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 SLFN12LQ6IEE8 588 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 TAF4BQ92750 862 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 DHTKD1Q96HY7 919 aaPredicted RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 LUC7L2Q9Y383 392 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 CHD4Q14839 1912 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 PIK3CAP42336 1068 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 PRPF4BQ13523 1007 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 CATSPER3Q86XQ3 398 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 DPF3Q92784 378 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 METTL14Q9HCE5 456 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 DNA2P51530 1060 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 NPEPPSP55786 919 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 BEX3Q00994 111 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 ARHGAP44Q17R89 818 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 CCDC144BQ3MJ40 725 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 MSANTD4Q8NCY6 345 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 GDAQ9Y2T3 454 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 PHLPP2Q6ZVD8 1323 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 RFC5P40937 340 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 FSCN1Q16658 493 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 PIN4Q9Y237 131 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 MEIS2O14770 477 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 RPA1P27694 616 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 THPOP40225 353 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 ST3GAL1Q11201 340 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 MXD4Q14582 209 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 MNS1Q8NEH6 495 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 CACTINQ8WUQ7 758 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 CCSER1Q9C0I3 900 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 KPNA6O60684 536 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 CETN2P41208 172 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 KIAA0753Q2KHM9 967 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 TEX2Q8IWB9 1127 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 ZBED3Q96IU2 234 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 RBPJLQ9UBG7 517 aa10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 N4BP2Q86UW6 1770 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-219ENST00000495955 ZSCAN12O43309 604 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 CDC42EP1Q00587 391 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 IGSF22Q8N9C0 903 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 MTG1Q9BT17 334 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 MRPL4Q9BYD3 311 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 MYH2Q9UKX2 1941 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 H3BRB1 525 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 N4BP1O75113 896 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 SLC10A3P09131 477 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 BCRP11274 1271 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 GRK4P32298 578 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 RDXP35241 583 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 EARS2Q5JPH6 523 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 COPS5Q92905 334 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 TUT1Q9H6E5 874 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 C1orf112Q9NSG2 853 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 PGK1P00558 417 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 CYLC1P35663 651 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 KIAA1841Q6NSI8 718 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 MED10Q9BTT4 135 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 CYP26B1Q9NR63 512 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 FAM207AQ9NSI2 230 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 PIK3CDO00329 1044 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 PQBP1O60828 265 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 RPS6KA5O75582 802 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 MAP2K2P36507 400 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 TOB1P50616 345 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 YWHAEP62258 255 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 DPCR1Q3MIW9 517 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 SPATA1Q5VX52 437 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 POLR3CQ9BUI4 534 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 LSM14BQ9BX40 385 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 TUBE1Q9UJT0 475 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 SNED1Q8TER0 1413 aa10.35□□□□□ -0.75
GAPVD1-219ENST00000495955 MSCO60682 206 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 PPP1R11O60927 126 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 HMGCRP04035 888 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms