RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TMEM168Q9H0V1 697 aa6.76□□□□□ -1.33
HMGB1P38-201ENST00000490557 OR10A5Q9H207 317 aa6.76□□□□□ -1.33
HMGB1P38-201ENST00000490557 NOC2LQ9Y3T9 749 aaKnown RBP6.76□□□□□ -1.33
HMGB1P38-201ENST00000490557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 ZSCAN22P10073 491 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 APEX1P27695 318 aaKnown RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 ID4P47928 161 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 MLLT6P55198 1093 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 SMAD3P84022 425 aaKnown RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 ALDH6A1Q02252 535 aaKnown RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 MAP3K12Q12852 859 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 LRRC32Q14392 662 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 RTP5Q14D33 572 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 BROXQ5VW32 411 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 RNF219Q5W0B1 726 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 MCTP2Q6DN12 878 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 LRSAM1Q6UWE0 723 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 RTN4RL1Q86UN2 441 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 FAM124AQ86V42 546 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 SP8Q8IXZ3 490 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 RPGRQ92834 1020 aaKnown RBP6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 MAML3Q96JK9 1138 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 GOLGA2P5Q9HBQ8 144 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 KCND1Q9NSA2 647 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 KCNG1Q9UIX4 513 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 MSRAQ9UJ68 235 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 ATP8A1Q9Y2Q0 1164 aa6.75□□□□□ -1.33
HMGB1P38-201ENST00000490557 MAFGO15525 162 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 TGM5O43548 720 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 MPIG6BO95866 241 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 IL18BPO95998 194 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 PRLP01236 227 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 ZNF28P17035 718 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 KCNC1P48547 511 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 GJA9P57773 515 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 SESN3P58005 492 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 PHC1P78364 1004 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 IL13RA1P78552 427 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 DLX2Q07687 328 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 TERF2Q15554 542 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 PRR31Q5SQ13 230 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 GPR158Q5T848 1215 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 CXXC5Q7LFL8 322 aaKnown RBP6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 SPATS2Q86XZ4 545 aaKnown RBP6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 IFNL2Q8IZJ0 200 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 ADAMTS17Q8TE56 1095 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 FERMT2Q96AC1 680 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 FOXRED1Q96CU9 486 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 SPATA25Q9BR10 227 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 AMNQ9BXJ7 453 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 POFUT1Q9H488 388 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 ZMAT4Q9H898 229 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 BARX1Q9HBU1 254 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 PCDH12Q9NPG4 1184 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 USP36Q9P275 1121 aaKnown RBP6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
HMGB1P38-201ENST00000490557 hCG_2014768A0A024R1R8 64 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 ST20-MTHFSA0A0A6YYL1 179 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 KDM1AO60341 852 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 KNG1P01042 644 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 ADCY8P40145 1251 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 SLURP1P55000 103 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 ANAPC15P60006 121 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 FAPQ12884 760 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 RGL3Q3MIN7 710 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 FAM26FQ5R3K3 315 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 FRMD7Q6ZUT3 714 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 ESPNLQ6ZVH7 1005 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 DDX42Q86XP3 938 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 TXNDC5Q8NBS9 432 aaKnown RBP6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 ZCCHC14Q8WYQ9 949 aaKnown RBP6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 USP40Q9NVE5 1235 aa6.73□□□□□ -1.33
HMGB1P38-201ENST00000490557 GPR39O43194 453 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 SASH1O94885 1247 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 RGS3P49796 1198 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 CD83Q01151 205 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 ADCY2Q08462 1091 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 NFATC3Q12968 1075 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 RASSF3Q86WH2 238 aa6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 LCORQ96JN0 433 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P38-201ENST00000490557 CUTAO60888 179 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 PRPF6O94906 941 aaKnown RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 EYA4O95677 639 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 BMP7P18075 431 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 CDK11BP21127 795 aaKnown RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 BCAR1P56945 870 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 AMPD3Q01432 767 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 KIAA2012Q0VF49 1180 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 STILQ15468 1287 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 BORAQ6PGQ7 559 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZNF761Q86XN6 746 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 C1QL4Q86Z23 238 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 SIAH1Q8IUQ4 282 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 NUDT10Q8NFP7 164 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 NUDT11Q96G61 164 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 YTHDC1Q96MU7 727 aaKnown RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 MYL10Q9BUA6 226 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms