RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 PTPN18Q99952 460 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 COL11A1P12107 1806 aaPredicted RBP20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 SLC16A4O15374 487 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 DKC1O60832 514 aaKnown RBP eCLIP20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 GCLCP48506 637 aaPredicted RBP20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 GHRHRQ02643 423 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 NEDD9Q14511 834 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 RGMBQ6NW40 437 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 ZNF668Q96K58 619 aaPredicted RBP20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 PCIF1Q9H4Z3 704 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 TRPC6Q9Y210 931 aa20.48■□□□□ 0.87
NECTIN3-206ENST00000485303 ENOX2Q16206 610 aaKnown RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 STAM2O75886 525 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 ITGBL1O95965 494 aaPredicted RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 EEF1GP26641 437 aaKnown RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 MATR3P43243 847 aaKnown RBP eCLIP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 LRRC63Q05C16 580 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 SMAP1Q8IYB5 467 aaPredicted RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 IMPACTQ9P2X3 320 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 A0A1B0GTH6 734 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 SLC26A4O43511 780 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 ZBTB48P10074 688 aaPredicted RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 KNOP1Q1ED39 458 aaKnown RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 CENPPQ6IPU0 288 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 ARMCX5Q6P1M9 558 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 ARMCX2Q7L311 632 aa20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 FAM207AQ9NSI2 230 aaPredicted RBP20.47■□□□□ 0.87
NECTIN3-206ENST00000485303 TCF7P36402 384 aaPredicted RBP20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 SYCP1Q15431 976 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 C16orf45Q96MC5 204 aaPredicted RBP20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 SCN4AP35499 1836 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 CALUO43852 315 aaPredicted RBP20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 SUPT20HL2P0C7V6 817 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 CASP14P31944 242 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 NR1I3Q14994 352 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 TMEM132AQ24JP5 1023 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 ANKRD23Q86SG2 305 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 ZNF862O60290 1169 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 CYP2B6P20813 491 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 RBL2Q08999 1139 aa20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.46■□□□□ 0.87
NECTIN3-206ENST00000485303 STAT5BP51692 787 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 TTLL4Q14679 1199 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 IRF2BP1Q8IU81 584 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 TMEM143Q96AN5 459 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 ASB14A6NK59 587 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 AKR1B15C9JRZ8 316 aaPredicted RBP20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 SMTNP53814 917 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 NOLC1Q14978 699 aaKnown RBP eCLIP20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 ANO5Q75V66 913 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 GPR142Q7Z601 462 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 C4orf19Q8IY42 314 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 ARIH2O95376 493 aa20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 DMP1Q13316 513 aaPredicted RBP20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 LIMA1Q9UHB6 759 aaKnown RBP20.45■□□□□ 0.86
NECTIN3-206ENST00000485303 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 LRRIQ4A6NIV6 560 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 IGF2BP3O00425 579 aaKnown RBP eCLIP20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 GTF3C2Q8WUA4 911 aaPredicted RBP20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 DRC1Q96MC2 740 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 PPP1R16BQ96T49 567 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 EXOC3O60645 756 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 HARSP12081 509 aaKnown RBP20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 RPL13P26373 211 aaKnown RBP20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 FAM160B1Q5W0V3 765 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 SAPCD2Q86UD0 394 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 METTL13Q8N6R0 699 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 SEPT1Q8WYJ6 367 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 IFT74Q96LB3 600 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 OTOFQ9HC10 1997 aa20.44■□□□□ 0.86
NECTIN3-206ENST00000485303 KRT9P35527 623 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 KLK7P49862 253 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 HSDL1Q3SXM5 330 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 RASAL3Q86YV0 1011 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 SLC7A3Q8WY07 619 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 KMT5AQ9NQR1 393 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 NKRFO15226 690 aaKnown RBP eCLIP20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 CACNA2D4Q7Z3S7 1137 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 CYP4F22Q6NT55 531 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 B3GNT9Q6UX72 402 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 BAG1Q99933 345 aaPredicted RBP20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 ODF2LQ9ULJ1 636 aa20.43■□□□□ 0.86
NECTIN3-206ENST00000485303 NR3C1P04150 777 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 XKR3Q5GH77 459 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 PRAMEF19Q5SWL8 479 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 TMX1Q9H3N1 280 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 NRBP2Q9NSY0 501 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 ARMCX3Q9UH62 379 aaPredicted RBP20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 MANSC4A6NHS7 340 aaPredicted RBP20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 ADCYAP1R1P41586 468 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 DNM2P50570 870 aa20.42■□□□□ 0.86
NECTIN3-206ENST00000485303 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms