RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 KIAA1024Q9UPX6 916 aa17.87■□□□□ 0.45
GPC1-207ENST00000466624 A0A1W2PQ27 194 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 A0A1W2PQ64 194 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 A0A1W2PQD8 194 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 DCDC2CA8MYV0 355 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 MAGEB2O15479 319 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 B4GALT4O60513 344 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 RARRES1P49788 294 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 RGS19P49795 217 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 HIC1Q14526 733 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 PTGISQ16647 500 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 SPECC1Q5M775 1068 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 MARCH8Q5T0T0 291 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 GDPD2Q9HCC8 539 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 TUBE1Q9UJT0 475 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 DNM3Q9UQ16 869 aa17.86■□□□□ 0.45
GPC1-207ENST00000466624 C22orf31O95567 290 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 EYA4O95677 639 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 RPLP2P05387 115 aaKnown RBP17.85■□□□□ 0.45
GPC1-207ENST00000466624 CMA1P23946 247 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 RFC5P40937 340 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 TLE2Q04725 743 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 PTK7Q13308 1070 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 KARSQ15046 597 aaKnown RBP17.85■□□□□ 0.45
GPC1-207ENST00000466624 MTERF2Q49AM1 385 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 MTHFD1LQ6UB35 978 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 SERINC5Q86VE9 423 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 RASSF8Q8NHQ8 419 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 PIGOQ8TEQ8 1089 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 PPP1R13LQ8WUF5 828 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 CEP170P1Q96L14 293 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 CTAGE1Q96RT6 745 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 JPH2Q9BR39 696 aaPredicted RBP17.85■□□□□ 0.45
GPC1-207ENST00000466624 TRMT13Q9NUP7 481 aaKnown RBP17.85■□□□□ 0.45
GPC1-207ENST00000466624 FAM13BQ9NYF5 915 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 ATP11BQ9Y2G3 1177 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 DNAH12Q6ZR08 3092 aa17.85■□□□□ 0.45
GPC1-207ENST00000466624 IGKV6-21A0A0C4DH24 114 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 FAM237AA0A1B0GTK4 181 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 TMEM150BA6NC51 233 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 ZBTB39O15060 712 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 TREHO43280 583 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 PQBP1O60828 265 aaKnown RBP17.84■□□□□ 0.45
GPC1-207ENST00000466624 MAFO75444 373 aaPredicted RBP17.84■□□□□ 0.45
GPC1-207ENST00000466624 PLCG1P19174 1290 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 KLRC1P26715 233 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 IGBP1P78318 339 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 RBL2Q08999 1139 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 XKR9Q5GH70 373 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 PLA2G4FQ68DD2 849 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 TAF2Q6P1X5 1199 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 CCDC73Q6ZRK6 1079 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 TRMT1LQ7Z2T5 733 aaKnown RBP17.84■□□□□ 0.45
GPC1-207ENST00000466624 TRAPPC12Q8WVT3 735 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 CCDC43Q96MW1 224 aaKnown RBP17.84■□□□□ 0.45
GPC1-207ENST00000466624 PYM1Q9BRP8 204 aaKnown RBP17.84■□□□□ 0.45
GPC1-207ENST00000466624 TRPV6Q9H1D0 765 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 STK17AQ9UEE5 414 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 NOD1Q9Y239 953 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 PCDHA2Q9Y5H9 948 aa17.84■□□□□ 0.45
GPC1-207ENST00000466624 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 E9PMD0 336 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 GAS2O43903 313 aaKnown RBP17.83■□□□□ 0.44
GPC1-207ENST00000466624 DGAT1O75907 488 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 CLTBP09497 229 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 NPEPPSP55786 919 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 ZNF200P98182 395 aaPredicted RBP17.83■□□□□ 0.44
GPC1-207ENST00000466624 FAAP100Q0VG06 881 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 ZRSR1Q15695 479 aaKnown RBP17.83■□□□□ 0.44
GPC1-207ENST00000466624 KCNK18Q7Z418 384 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 RPAINQ86UA6 219 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 LINC01465Q8N7H1 131 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 RETREG2Q8NC44 543 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 SLC7A3Q8WY07 619 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 DHX33Q9H6R0 707 aaKnown RBP17.83■□□□□ 0.44
GPC1-207ENST00000466624 HPSEQ9Y251 543 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 TANC1Q9C0D5 1861 aa17.83■□□□□ 0.44
GPC1-207ENST00000466624 ARHGEF35A5YM69 484 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 CAND2O75155 1236 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 CYP2C9P11712 490 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 RRAGBQ5VZM2 374 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 CCDC155Q8N6L0 562 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 SYT2Q8N9I0 419 aaPredicted RBP17.82■□□□□ 0.44
GPC1-207ENST00000466624 CAGE1Q8TC20 777 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 MRPS27Q92552 414 aaKnown RBP17.82■□□□□ 0.44
GPC1-207ENST00000466624 RAD54LQ92698 747 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 BHMT2Q9H2M3 363 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 CUEDC2Q9H467 287 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 BLOC1S4Q9NUP1 217 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 KCND2Q9NZV8 630 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 TBX21Q9UL17 535 aa17.82■□□□□ 0.44
GPC1-207ENST00000466624 MKI67P46013 3256 aaKnown RBP17.81■□□□□ 0.44
GPC1-207ENST00000466624 A0A087X0B3 334 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 TMOD1P28289 359 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
GPC1-207ENST00000466624 E2F4Q16254 413 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 NAALADL2Q58DX5 795 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms