RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 SLC39A14Q15043 492 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 LRRC26Q2I0M4 334 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 TRIM50Q86XT4 487 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 CCDC60Q8IWA6 550 aaPredicted RBP11.15□□□□□ -0.62
VPS45-204ENST00000460366 C4orf19Q8IY42 314 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 C7orf31Q8N865 590 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 IGSF22Q8N9C0 903 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 ERMNQ8TAM6 284 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 ATP8B4Q8TF62 1192 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 LRCH3Q96II8 777 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 USP28Q96RU2 1077 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 HSD17B14Q9BPX1 270 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 RNPEPQ9H4A4 650 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 NRBP2Q9NSY0 501 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 GABBR1Q9UBS5 961 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 CLIC4Q9Y696 253 aa11.15□□□□□ -0.62
VPS45-204ENST00000460366 NRCAMQ92823 1304 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
VPS45-204ENST00000460366 SLC26A4O43511 780 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 SLITRK3O94933 977 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 LYPLA2O95372 231 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 YEATS4O95619 227 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 CD4P01730 458 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 XRCC6P12956 609 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS45-204ENST00000460366 ATP4AP20648 1035 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 ADAM17P78536 824 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 TLE2Q04725 743 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 IL17AQ16552 155 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 TRIM60Q495X7 471 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 ZNF484Q5JVG2 852 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 FOXD4L5Q5VV16 416 aaPredicted RBP11.14□□□□□ -0.63
VPS45-204ENST00000460366 NCAPH2Q6IBW4 605 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 FAM126BQ8IXS8 530 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 LINC00301Q8NCQ3 95 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 FOXD4L4Q8WXT5 416 aaPredicted RBP11.14□□□□□ -0.63
VPS45-204ENST00000460366 AK8Q96MA6 479 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 EIF2AK1Q9BQI3 630 aaKnown RBP11.14□□□□□ -0.63
VPS45-204ENST00000460366 POLR3CQ9BUI4 534 aaPredicted RBP11.14□□□□□ -0.63
VPS45-204ENST00000460366 NIFKQ9BYG3 293 aaKnown RBP11.14□□□□□ -0.63
VPS45-204ENST00000460366 ZSWIM4Q9H7M6 989 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 TUFT1Q9NNX1 390 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 LRWD1Q9UFC0 647 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 GTF2IRD1Q9UHL9 959 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 PPME1Q9Y570 386 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 COL1A2P08123 1366 aa11.14□□□□□ -0.63
VPS45-204ENST00000460366 C17orf102A2RUQ5 167 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 ZNF862O60290 1169 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 PPP6R2O75170 966 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 STBD1O95210 358 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 RPA1P27694 616 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 LONP1P36776 959 aaKnown RBP11.13□□□□□ -0.63
VPS45-204ENST00000460366 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
VPS45-204ENST00000460366 RGL1Q9NZL6 768 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 RCOR1Q9UKL0 485 aa11.13□□□□□ -0.63
VPS45-204ENST00000460366 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
VPS45-204ENST00000460366 DOCK5Q9H7D0 1870 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 KIAA0355O15063 1070 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 PQBP1O60828 265 aaKnown RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 OATP04181 439 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 RPLP2P05387 115 aaKnown RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 SPATA31C1P0DKV0 1188 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 INSRRP14616 1297 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 MARK3P27448 753 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 PRKCEQ02156 737 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 PTK7Q13308 1070 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 STK38Q15208 465 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 GRIK4Q16099 956 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 UGCGQ16739 394 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 GDF6Q6KF10 455 aaPredicted RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 OTUD6AQ7L8S5 288 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 DPF3Q92784 378 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 DYDC2Q96IM9 177 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 LXNQ9BS40 222 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 FTOQ9C0B1 505 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS45-204ENST00000460366 ANKEF1Q9NU02 776 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 TSR3Q9UJK0 312 aaKnown RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 FBXO2Q9UK22 296 aaPredicted RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 ATP11BQ9Y2G3 1177 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 NR2E3Q9Y5X4 410 aa11.12□□□□□ -0.63
VPS45-204ENST00000460366 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
VPS45-204ENST00000460366 VWA3AA6NCI4 1184 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms