RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TEKT3Q9BXF9 490 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 SAMM50Q9Y512 469 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 RALGAPA2Q2PPJ7 1873 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 ZNF862O60290 1169 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 UPP2O95045 317 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 FDPSP14324 419 aaKnown RBP21.91■■□□□ 1.1
USP40-207ENST00000450940 XBP1P17861 261 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 CD52P31358 61 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 JAK3P52333 1124 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 TMEM62Q0P6H9 643 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 RTN4RL1Q86UN2 441 aaPredicted RBP21.91■■□□□ 1.1
USP40-207ENST00000450940 ETNPPLQ8TBG4 499 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 GTF3C6Q969F1 213 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 SAMD11Q96NU1 681 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 YME1L1Q96TA2 773 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 FTHL17Q9BXU8 183 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 UNC45AQ9H3U1 944 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 THEGQ9P2T0 379 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 ORC3Q9UBD5 711 aaPredicted RBP21.91■■□□□ 1.1
USP40-207ENST00000450940 PADI3Q9ULW8 664 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 CEP131Q9UPN4 1083 aa21.91■■□□□ 1.1
USP40-207ENST00000450940 NEK4P51957 841 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 INF2Q27J81 1249 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 KRT40Q6A162 431 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 LINC01599Q8WXQ3 324 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 WASF1Q92558 559 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 C17orf80Q9BSJ5 609 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 RC3H2Q9HBD1 1191 aaKnown RBP21.9■■□□□ 1.1
USP40-207ENST00000450940 GJB4Q9NTQ9 266 aa21.9■■□□□ 1.1
USP40-207ENST00000450940 MAGEB2O15479 319 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 LARGE1O95461 756 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 TJAP1Q5JTD0 557 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 PPP4R3AQ6IN85 833 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 LINC01465Q8N7H1 131 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 NECAB1Q8N987 351 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 GDPD5Q8WTR4 605 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 GJA10Q969M2 543 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 NRBP2Q9NSY0 501 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 MTUS1Q9ULD2 1270 aa21.89■■□□□ 1.09
USP40-207ENST00000450940 VCANP13611 3396 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 CCDC194A0A1B0GVG4 234 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 OATP04181 439 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 MICALL1Q8N3F8 863 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 OXER1Q8TDS5 423 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 SYMPKQ92797 1274 aaKnown RBP21.88■■□□□ 1.09
USP40-207ENST00000450940 ZNF689Q96CS4 500 aaPredicted RBP21.88■■□□□ 1.09
USP40-207ENST00000450940 ASB2Q96Q27 587 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 TSPYL2Q9H2G4 693 aaPredicted RBP21.88■■□□□ 1.09
USP40-207ENST00000450940 CDHR5Q9HBB8 845 aa21.88■■□□□ 1.09
USP40-207ENST00000450940 DDX25Q9UHL0 483 aaKnown RBP21.88■■□□□ 1.09
USP40-207ENST00000450940 DTNBO60941 627 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 GCFC2P16383 781 aaKnown RBP21.87■■□□□ 1.09
USP40-207ENST00000450940 MRPS5P82675 430 aaKnown RBP21.87■■□□□ 1.09
USP40-207ENST00000450940 PAK2Q13177 524 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 UGCGQ16739 394 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 EPC2Q52LR7 807 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 MIER3Q7Z3K6 550 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 NEK8Q86SG6 692 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 NSUN7Q8NE18 718 aaKnown RBP21.87■■□□□ 1.09
USP40-207ENST00000450940 FBXO22Q8NEZ5 403 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 TMX1Q9H3N1 280 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 ERVK-5Q9HDB9 667 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 KCNMB3Q9NPA1 279 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 TTC28Q96AY4 2481 aa21.87■■□□□ 1.09
USP40-207ENST00000450940 CHMP2AO43633 222 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 SLC37A4O43826 429 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 GPR32O75388 356 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 DGKIO75912 1065 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 STBD1O95210 358 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 LINC00271P0C7V0 271 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 CRYBB1P53674 252 aaPredicted RBP21.86■■□□□ 1.09
USP40-207ENST00000450940 PRKCEQ02156 737 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 TARBP2Q15633 366 aaKnown RBP21.86■■□□□ 1.09
USP40-207ENST00000450940 LETM2Q2VYF4 491 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 TMEM192Q8IY95 271 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 ZNF710Q8N1W2 664 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 TMEM40Q8WWA1 233 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 TNFRSF25Q93038 417 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 FAM20AQ96MK3 541 aa21.86■■□□□ 1.09
USP40-207ENST00000450940 NIFKQ9BYG3 293 aaKnown RBP21.86■■□□□ 1.09
USP40-207ENST00000450940 NOC2LQ9Y3T9 749 aaKnown RBP21.86■■□□□ 1.09
USP40-207ENST00000450940 H3BNC9 293 aa21.85■■□□□ 1.09
USP40-207ENST00000450940 ODR4Q5SWX8 454 aa21.85■■□□□ 1.09
USP40-207ENST00000450940 TRMT1LQ7Z2T5 733 aaKnown RBP21.85■■□□□ 1.09
USP40-207ENST00000450940 FIBCD1Q8N539 461 aa21.85■■□□□ 1.09
USP40-207ENST00000450940 METTL13Q8N6R0 699 aa21.85■■□□□ 1.09
USP40-207ENST00000450940 CLP1Q92989 425 aaKnown RBP21.85■■□□□ 1.09
USP40-207ENST00000450940 NAP1L4Q99733 375 aaKnown RBP21.85■■□□□ 1.09
USP40-207ENST00000450940 COG5Q9UP83 839 aa21.85■■□□□ 1.09
USP40-207ENST00000450940 SPTBN5Q9NRC6 3674 aaKnown RBP21.85■■□□□ 1.09
USP40-207ENST00000450940 ADGRA3Q8IWK6 1321 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 TBX3O15119 743 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 RPS6KA5O75582 802 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 PPP2R5CQ13362 524 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 TMEM266Q2M3C6 531 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 EARS2Q5JPH6 523 aaKnown RBP21.84■■□□□ 1.09
USP40-207ENST00000450940 EFCAB12Q6NXP0 572 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 PIK3AP1Q6ZUJ8 805 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 NPAS4Q8IUM7 802 aa21.84■■□□□ 1.09
USP40-207ENST00000450940 CEP89Q96ST8 783 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms