RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 PGM2Q96G03 612 aa18.67■□□□□ 0.58
SCUBE2-202ENST00000450649 MAST2Q6P0Q8 1798 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 TSPY3P0CV98 308 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 IFI35P80217 286 aaPredicted RBP18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 POU5F1Q01860 360 aaKnown RBP18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 SLC5A4Q9NY91 659 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 NAGPAQ9UK23 515 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 ZNF335Q9H4Z2 1342 aaPredicted RBP18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 NUDT17P0C025 328 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 PSMD2Q13200 908 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 IRF2BP2Q7Z5L9 587 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 DAAM2Q86T65 1068 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 TRIM59Q8IWR1 403 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 RNF217Q8TC41 542 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 SPZ1Q9BXG8 430 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 AZI2Q9H6S1 392 aa18.66■□□□□ 0.58
SCUBE2-202ENST00000450649 CCDC88AQ3V6T2 1871 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 CCND1P24385 295 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 IFNAR2P48551 515 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 DDB1Q16531 1140 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 ALKBH5Q6P6C2 394 aaKnown RBP18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 FOXR2Q6PJQ5 311 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 TMEM47Q9BQJ4 181 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 ECT2Q9H8V3 914 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 SUCLA2Q9P2R7 463 aaPredicted RBP18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 STXBP5LQ9Y2K9 1186 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 NR2E1Q9Y466 385 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 CCDC169A6NNP5 214 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 RGS16O15492 202 aaPredicted RBP18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 NAPAP54920 295 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 ZNF444Q8N0Y2 327 aaPredicted RBP18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 NEK9Q8TD19 979 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 RAD54LQ92698 747 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 PABPC3Q9H361 631 aaKnown RBP18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
SCUBE2-202ENST00000450649 ENO4A6NNW6 628 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 KLRF2D3W0D1 207 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 GNA11P29992 359 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 PMS2P54278 862 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 ORC2Q13416 577 aaPredicted RBP18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 DENND2CQ68D51 928 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 SLFN11Q7Z7L1 901 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 RNF25Q96BH1 459 aaPredicted RBP18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 SH3GL3Q99963 347 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 NSRP1Q9H0G5 558 aaKnown RBP18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 RAB17Q9H0T7 212 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 CCDC134Q9H6E4 229 aa18.64■□□□□ 0.58
SCUBE2-202ENST00000450649 A8MUI8 341 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 FGGP02679 453 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 ACTN1P12814 892 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 ERICH1Q86X53 443 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 TBCKQ8TEA7 893 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 C6orf50Q9HD87 102 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 ZDHHC18Q9NUE0 388 aa18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 CORO1CQ9ULV4 474 aaPredicted RBP18.64■□□□□ 0.57
SCUBE2-202ENST00000450649 SPDYE3A6NKU9 549 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 SNX3O60493 162 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 EPS15P42566 896 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 KCNK18Q7Z418 384 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 NT5DC3Q86UY8 548 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 CEP63Q96MT8 703 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 STX8Q9UNK0 236 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 SMCO2A6NFE2 343 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 KIF2BQ8N4N8 673 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 NUDT12Q9BQG2 462 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 KRT16P08779 473 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 COASYQ13057 564 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 NELFCDQ8IXH7 590 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 SH3RF3Q8TEJ3 882 aaPredicted RBP18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 KLHL29Q96CT2 875 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 CPVLQ9H3G5 476 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 HOMER3Q9NSC5 361 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 TBC1D7Q9P0N9 293 aa18.63■□□□□ 0.57
SCUBE2-202ENST00000450649 POTEMA6NI47 508 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 GOLGA8HP0CJ92 632 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 SLC29A2Q14542 456 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 DUPD1Q68J44 220 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 TXNRD3Q86VQ6 643 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 FGFBP2Q9BYJ0 223 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 JAG2Q9Y219 1238 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 RGL2O15211 777 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 GNA14O95837 355 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 BLMHQ13867 455 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 GALNTL6Q49A17 601 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 AP1ARQ63HQ0 302 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 MARCH10Q8NA82 808 aaPredicted RBP18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 PARD3BQ8TEW8 1205 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 HES6Q96HZ4 224 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 NLRP3Q96P20 1036 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 ERP44Q9BS26 406 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 STK38LQ9Y2H1 464 aa18.62■□□□□ 0.57
SCUBE2-202ENST00000450649 AGTP01019 485 aa18.61■□□□□ 0.57
SCUBE2-202ENST00000450649 COPB2P35606 906 aa18.61■□□□□ 0.57
SCUBE2-202ENST00000450649 PDE6CP51160 858 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms