RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ECM1Q16610 540 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 AADACL2Q6P093 401 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 RAD54LQ92698 747 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 RTCBQ9Y3I0 505 aaKnown RBP15.16■□□□□ 0.02
VPS52-212ENST00000445902 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 SLIT2O94813 1529 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 KCNH2Q12809 1159 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 GJB7Q6PEY0 223 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 SLC44A5Q8NCS7 719 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 SLC17A8Q8NDX2 589 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 U2AF1L4Q8WU68 220 aaKnown RBP15.15■□□□□ 0.02
VPS52-212ENST00000445902 PABPC3Q9H361 631 aaKnown RBP15.15■□□□□ 0.02
VPS52-212ENST00000445902 TCP11X1B4DZS4 312 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 SNX3O60493 162 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 KRT13P13646 458 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 GRM4Q14833 912 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 IFI16Q16666 785 aaKnown RBP15.15■□□□□ 0.02
VPS52-212ENST00000445902 ZCWPW2Q504Y3 356 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 NT5DC3Q86UY8 548 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 TRIM59Q8IWR1 403 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 CEP120Q8N960 986 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 DAGLBQ8NCG7 672 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
VPS52-212ENST00000445902 SH3GL3Q99963 347 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 TXLNGYQ9BZA5 131 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 RIC8AQ9NPQ8 531 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 LRP5O75197 1615 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 COL4A1P02462 1669 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 IL2RBP14784 551 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 ABCB4P21439 1286 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 MAP2K1Q02750 393 aaPredicted RBP15.15■□□□□ 0.02
VPS52-212ENST00000445902 MECOMQ03112 1051 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 TAF11Q15544 211 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 FAM26FQ5R3K3 315 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 KRT25Q7Z3Z0 450 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 ZDHHC18Q9NUE0 388 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 AJAP1Q9UKB5 411 aaPredicted RBP15.15■□□□□ 0.02
VPS52-212ENST00000445902 DAAM1Q9Y4D1 1078 aa15.15■□□□□ 0.02
VPS52-212ENST00000445902 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 KLRF2D3W0D1 207 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 LINGO3P0C6S8 592 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 PCP11498 1178 aaKnown RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 CREB1P16220 341 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 CCND1P24385 295 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 DCAF12L1Q5VU92 463 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 OSBPL1AQ9BXW6 950 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 CRNKL1Q9BZJ0 848 aaKnown RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 ADAM22Q9P0K1 906 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 CCDC169A6NNP5 214 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 ALADP13716 330 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 ATP2A2P16615 1042 aaKnown RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 MSH2P43246 934 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 POU5F1Q01860 360 aaKnown RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 ADAM9Q13443 819 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 DCAF17Q5H9S7 520 aaPredicted RBP15.14■□□□□ 0.01
VPS52-212ENST00000445902 NUGGCQ68CJ6 796 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 CCDC25Q86WR0 208 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 PROM2Q8N271 834 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 RASGEF1CQ8N431 466 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 ANKRD42Q8N9B4 389 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 GDAP1Q8TB36 358 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 SEC14L1Q92503 715 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 RAB17Q9H0T7 212 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 STK17AQ9UEE5 414 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 PPP1R9AQ9ULJ8 1098 aa15.14■□□□□ 0.01
VPS52-212ENST00000445902 H2AFZP0C0S5 128 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 UCHL3P15374 230 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 KLRK1P26718 216 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 PRDX5P30044 214 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 COPS2P61201 443 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 ADCY1Q08828 1119 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
VPS52-212ENST00000445902 H2AFVQ71UI9 128 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 PGM2Q96G03 612 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 ERP44Q9BS26 406 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 MKNK2Q9HBH9 465 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 USP15Q9Y4E8 981 aaPredicted RBP15.13■□□□□ 0.01
VPS52-212ENST00000445902 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
VPS52-212ENST00000445902 KLRC3Q07444 240 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 GNPTABQ3T906 1256 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 TCERG1LQ5VWI1 586 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 C18orf8Q96DM3 657 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 AMFRQ9UKV5 643 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 RPTORQ8N122 1335 aa15.13■□□□□ 0.01
VPS52-212ENST00000445902 MPHOSPH10O00566 681 aaKnown RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 TSPY3P0CV98 308 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 TSPY8P0CW00 308 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 CYP19A1P11511 503 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 CNGA2Q16280 664 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 CCDC152Q4G0S7 254 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 KRT79Q5XKE5 535 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms