RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SNX29Q8TEQ0 813 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 DHX58Q96C10 678 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 FUCA2Q9BTY2 467 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 SERTAD1Q9UHV2 236 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 MTCH2Q9Y6C9 303 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 A0A0U1RQG5 324 aaPredicted RBP13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 ASB14A6NK59 587 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 TLL1O43897 1013 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 RPA1P27694 616 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 CDC25AP30304 524 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 SEMA3FQ13275 785 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 GRB10Q13322 594 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 POSTNQ15063 836 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 NAALADL2Q58DX5 795 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 RDM1Q8NG50 284 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 FGD4Q96M96 766 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 HIPK3Q9H422 1215 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
AC009404.1-202ENST00000439955 KIAA1217Q5T5P2 1943 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 SPATA31C2B4DYI2 1134 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 DHX15O43143 795 aaKnown RBP13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 GPR37L1O60883 481 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 DUSP11O75319 330 aaKnown RBP13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 RGS20O76081 388 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 CAVIN2O95810 425 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 TGFB3P10600 412 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 PLCG1P19174 1290 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 CCT6AP40227 531 aaKnown RBP13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 BEX3Q00994 111 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 KRT76Q01546 638 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 EPHA7Q15375 998 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 GNASQ5JWF2 1037 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 NT5DC1Q5TFE4 455 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 NCAPH2Q6IBW4 605 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 KCNV1Q6PIU1 500 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 CKAP2LQ8IYA6 745 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 MSL3Q8N5Y2 521 aaKnown RBP13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 GJA10Q969M2 543 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 PANK2Q9BZ23 570 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 TSPY26PQ9H489 355 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 TCEAL9Q9UHQ7 104 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 SLC4A7Q9Y6M7 1214 aa13.1□□□□□ -0.31
AC009404.1-202ENST00000439955 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 SMC2O95347 1197 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 CD4P01730 458 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 CA3P07451 260 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 KCNA2P16389 499 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 SFNP31947 248 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 JAK3P52333 1124 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 AMPD3Q01432 767 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 TYRO3Q06418 890 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 ITGB3BPQ13352 177 aaPredicted RBP13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 TRIML1Q8N9V2 468 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 PCSK9Q8NBP7 692 aaKnown RBP13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 LRRC27Q9C0I9 530 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 PCDHA11Q9Y5I1 949 aa13.09□□□□□ -0.31
AC009404.1-202ENST00000439955 FSD2A1L4K1 749 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 EML1O00423 815 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 ATP2A2P16615 1042 aaKnown RBP13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 PTGS1P23219 599 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 MRE11P49959 708 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 DPYDQ12882 1025 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 PNOCQ13519 176 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 ZRSR1Q15695 479 aaKnown RBP13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 STX1AQ16623 288 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 CNNM4Q6P4Q7 775 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 CXCL17Q6UXB2 119 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 MAMDC4Q6UXC1 1216 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 MIER3Q7Z3K6 550 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 RAD54LQ92698 747 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 SCLYQ96I15 445 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms