RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 NSUN6Q8TEA1 469 aaKnown RBP17.32■□□□□ 0.36
TVP23C-203ENST00000428082 LARP4BQ92615 738 aaKnown RBP17.32■□□□□ 0.36
TVP23C-203ENST00000428082 MBOAT7Q96N66 472 aa17.32■□□□□ 0.36
TVP23C-203ENST00000428082 MMTAG2Q9BU76 263 aaKnown RBP17.32■□□□□ 0.36
TVP23C-203ENST00000428082 MYO6Q9UM54 1294 aa17.32■□□□□ 0.36
TVP23C-203ENST00000428082 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
TVP23C-203ENST00000428082 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
TVP23C-203ENST00000428082 DNAJC25-GNG10A0A024R161 153 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 SOWAHBA6NEL2 793 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 MAPK4P31152 587 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 MRPS9P82933 396 aaKnown RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 LRRC63Q05C16 580 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 STK4Q13043 487 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 PCNX4Q63HM2 1172 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 GUF1Q8N442 669 aaKnown RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 MSL3Q8N5Y2 521 aaKnown RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 LENG9Q96B70 501 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 RPGRIP1Q96KN7 1286 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 PCMTD1Q96MG8 357 aaPredicted RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 CHP1Q99653 195 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 TSGA10Q9BZW7 698 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 TTYH3Q9C0H2 523 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 RAB21Q9UL25 225 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 IGLV3-22A0A075B6J6 115 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 EIF3CLB5ME19 914 aaKnown RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 TBC1D8O95759 1140 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 NR3C2P08235 984 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 MCM3P25205 808 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 PRR16Q569H4 304 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 KIAA1328Q86T90 577 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 DNERQ8NFT8 737 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 UIMC1Q96RL1 719 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 EIF3CQ99613 913 aaKnown RBP17.31■□□□□ 0.36
TVP23C-203ENST00000428082 IVNS1ABPQ9Y6Y0 642 aa17.31■□□□□ 0.36
TVP23C-203ENST00000428082 STRNO43815 780 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 HSPA6P17066 643 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 ADORA2AP29274 412 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 ALDH5A1P51649 535 aaPredicted RBP17.3■□□□□ 0.36
TVP23C-203ENST00000428082 GRB10Q13322 594 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 Q4G0T1 1027 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 PLEKHH3Q7Z736 793 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 PKNOX2Q96KN3 472 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 FGD4Q96M96 766 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 TSG101Q99816 390 aa17.3■□□□□ 0.36
TVP23C-203ENST00000428082 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
TVP23C-203ENST00000428082 TRPA1O75762 1119 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 C1QTNF8P60827 252 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 CKAP4Q07065 602 aaKnown RBP17.29■□□□□ 0.36
TVP23C-203ENST00000428082 CEP55Q53EZ4 464 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 CCDC122Q5T0U0 273 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 TAF3Q5VWG9 929 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 RAD54LQ92698 747 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 HAS1Q92839 578 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 GJA10Q969M2 543 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 UBXN6Q9BZV1 441 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 RNF186Q9NXI6 227 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 GUCA1BQ9UMX6 200 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 KDM3AQ9Y4C1 1321 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 MGAMO43451 1857 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 A0A0U1RQJ8 604 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 SEC31AO94979 1220 aaKnown RBP17.29■□□□□ 0.36
TVP23C-203ENST00000428082 ITGB5P18084 799 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 GRB14Q14449 540 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 LONRF2Q1L5Z9 754 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 WDR59Q6PJI9 974 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 ABRAQ8N0Z2 381 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 SNX29Q8TEQ0 813 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 ATRIPQ8WXE1 791 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 MXRA8Q9BRK3 442 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 NT5C3AQ9H0P0 336 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
TVP23C-203ENST00000428082 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
TVP23C-203ENST00000428082 ZSWIM8A7E2V4 1837 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 MEIS1O00470 390 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 EIF3JO75822 258 aaKnown RBP17.28■□□□□ 0.36
TVP23C-203ENST00000428082 CCND2P30279 289 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 AMPD2Q01433 879 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 MAN2A1Q16706 1144 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 TMEM119Q4V9L6 283 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 VWA3BQ502W6 1294 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 HDXQ7Z353 690 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 JAKMIP2Q96AA8 810 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 PNMA5Q96PV4 448 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 EDEM3Q9BZQ6 932 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 NHEJ1Q9H9Q4 299 aaPredicted RBP17.28■□□□□ 0.36
TVP23C-203ENST00000428082 KCNMB3Q9NPA1 279 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 REXO2Q9Y3B8 237 aaKnown RBP17.28■□□□□ 0.36
TVP23C-203ENST00000428082 UBIAD1Q9Y5Z9 338 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 MCM3APO60318 1980 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 LRRC37A2A6NM11 1700 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 KIAA1217Q5T5P2 1943 aa17.28■□□□□ 0.36
TVP23C-203ENST00000428082 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
TVP23C-203ENST00000428082 MYMKA6NI61 221 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms