RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ERVK-5Q9HDB9 667 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 TMEM59LQ9UK28 342 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 UTP11Q9Y3A2 253 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 LRRD1A4D1F6 860 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 SMAPO00193 183 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 PGRMC1O00264 195 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 TRAF5O00463 557 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 TARSP26639 723 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 PEX26Q7Z412 305 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 SCFD2Q8WU76 684 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 FGFBP2Q9BYJ0 223 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 EPB41L4BQ9H329 900 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 OSGEPQ9NPF4 335 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 CCNT1O60563 726 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 PYGBP11216 843 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 ABCB4P21439 1286 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 LACTBP83111 547 aaPredicted RBP12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 MAN2A1Q16706 1144 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 HEATR3Q7Z4Q2 680 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 UTP4Q969X6 686 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 TLCD1Q96CP7 247 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 CRAMP1Q96RY5 1269 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 TSKSQ9UJT2 592 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 SUGT1Q9Y2Z0 365 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 ATRNO75882 1429 aa12.25□□□□□ -0.45
SEC61A1-202ENST00000424880 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 HIP1RO75146 1068 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 GOLGA8HP0CJ92 632 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 KRT13P13646 458 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CYP7A1P22680 504 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 TXKP42681 527 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 SLC18A3Q16572 532 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 HAO1Q9UJM8 370 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 A0A0G2JS52 829 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 NPHP3-ACAD11A0A0J9YXS1 232 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 PDE8BO95263 885 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CCNG1P51959 295 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 PMS2P54278 862 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 MGAT5Q09328 741 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 EAPPQ56P03 285 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 DENND2CQ68D51 928 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 MTHFD1LQ6UB35 978 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 RFX8Q6ZV50 586 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 TMTC3Q6ZXV5 915 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CCDC84Q86UT8 332 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 TRIM74Q86UV6 250 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 TRIM73Q86UV7 250 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 APLFQ8IW19 511 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 BLIDQ8IZY5 108 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 MOV10L1Q9BXT6 1211 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 TMEM165Q9HC07 324 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 PCMTD2Q9NV79 361 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 RNF14Q9UBS8 474 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CNTNAP5Q8WYK1 1306 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CFAP73A6NFT4 308 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 ASAP2O43150 1006 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 PPFIA2O75334 1257 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 ACSL3O95573 720 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CNGA1P29973 690 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 MMP13P45452 471 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 FIGNQ5HY92 759 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 CCNJLQ8IV13 435 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.24□□□□□ -0.452e-9■□□□□ 9
SEC61A1-202ENST00000424880 UBE2OQ9C0C9 1292 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 ZHX3Q9H4I2 956 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 JAG2Q9Y219 1238 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 USP15Q9Y4E8 981 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-202ENST00000424880 MYMKA6NI61 221 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 RNF8O76064 485 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 PLCG2P16885 1265 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 GJB7Q6PEY0 223 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 ATP8B4Q8TF62 1192 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 ANKRD27Q96NW4 1050 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 CHCHD3Q9NX63 227 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 RGL1Q9NZL6 768 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 TMOD4Q9NZQ9 345 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 CHD4Q14839 1912 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 SERPING1P05155 500 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 MAGEA8P43361 318 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 MTA1Q13330 715 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 MTMR3Q13615 1198 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 ITIH4Q14624 930 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 ZNF571Q7Z3V5 609 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 PBKQ96KB5 322 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 CNOT10Q9H9A5 744 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
SEC61A1-202ENST00000424880 SLC9A1P19634 815 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 GALNT15Q8N3T1 639 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 C18orf8Q96DM3 657 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 NUDCD1Q96RS6 583 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms