RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PRKAG3Q9UGI9 489 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 NID2Q14112 1375 aa18.33■□□□□ 0.53
COL18A1-205ENST00000423214 IGLV3-22A0A075B6J6 115 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 DENND3A2RUS2 1198 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 RPS6KA5O75582 802 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 CPA1P15085 419 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 ADD1P35611 737 aaKnown RBP18.33■□□□□ 0.52
COL18A1-205ENST00000423214 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
COL18A1-205ENST00000423214 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 ZNF484Q5JVG2 852 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 Q6ZUG5 572 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 BRF1Q92994 677 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 ZMYND12Q9H0C1 365 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 C11orf16Q9NQ32 467 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 TBC1D22BQ9NU19 505 aa18.33■□□□□ 0.52
COL18A1-205ENST00000423214 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
COL18A1-205ENST00000423214 CYP3A4P08684 503 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 ALADP13716 330 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 GNA11P29992 359 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 SARSP49591 514 aaKnown RBP18.32■□□□□ 0.52
COL18A1-205ENST00000423214 NDUFV1P49821 464 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 SPOUT1Q5T280 376 aaKnown RBP18.32■□□□□ 0.52
COL18A1-205ENST00000423214 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-205ENST00000423214 SWSAP1Q6NVH7 229 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 RTN4RL1Q86UN2 441 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-205ENST00000423214 CCDC148Q8NFR7 591 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 POP1Q99575 1024 aaKnown RBP18.32■□□□□ 0.52
COL18A1-205ENST00000423214 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
COL18A1-205ENST00000423214 ITGB1P05556 798 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 PSAPP07602 524 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 ZP2Q05996 745 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 CTC1Q2NKJ3 1217 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 FAM43BQ6ZT52 329 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-205ENST00000423214 TRMT1LQ7Z2T5 733 aaKnown RBP18.31■□□□□ 0.52
COL18A1-205ENST00000423214 ADHFE1Q8IWW8 467 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 SMAP1Q8IYB5 467 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-205ENST00000423214 KLHL23Q8NBE8 558 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 BICD2Q8TD16 824 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 BBXQ8WY36 941 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-205ENST00000423214 PPP1R16BQ96T49 567 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 ERVK-5Q9HDB9 667 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 C1orf112Q9NSG2 853 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 SAMM50Q9Y512 469 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 PCDHB7Q9Y5E2 793 aa18.31■□□□□ 0.52
COL18A1-205ENST00000423214 MUC6Q6W4X9 2439 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 PRR33A8MZF0 331 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 GPR182O15218 404 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 DHX15O43143 795 aaKnown RBP18.3■□□□□ 0.52
COL18A1-205ENST00000423214 TBX10O75333 385 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 GTF2F1P35269 517 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■□□ 19.2
COL18A1-205ENST00000423214 LTBRP36941 435 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 GATMP50440 423 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 SMAD4Q13485 552 aaKnown RBP18.3■□□□□ 0.52
COL18A1-205ENST00000423214 KIZQ2M2Z5 673 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 PRR16Q569H4 304 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 CRIPAKQ8N1N5 446 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 METTL13Q8N6R0 699 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 POF1BQ8WVV4 589 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 TMEM40Q8WWA1 233 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 CRYGNQ8WXF5 182 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 PHKBQ93100 1093 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 FAM167AQ96KS9 214 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 OSMRQ99650 979 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 ADAM2Q99965 735 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 CD207Q9UJ71 328 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 CEP131Q9UPN4 1083 aa18.3■□□□□ 0.52
COL18A1-205ENST00000423214 NOC2LQ9Y3T9 749 aaKnown RBP18.3■□□□□ 0.52
COL18A1-205ENST00000423214 ARIH1Q9Y4X5 557 aaPredicted RBP18.3■□□□□ 0.52
COL18A1-205ENST00000423214 ZBTB42B2RXF5 422 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 LINC01565O15544 149 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 PRPF3O43395 683 aaKnown RBP18.29■□□□□ 0.52
COL18A1-205ENST00000423214 MBTPS2O43462 519 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 DCXO43602 365 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 MGEA5O60502 916 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 C22orf31O95567 290 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 NEFLP07196 543 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 DLX2Q07687 328 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-205ENST00000423214 SMAD2Q15796 467 aaKnown RBP18.29■□□□□ 0.52
COL18A1-205ENST00000423214 KIAA0319LQ8IZA0 1049 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
COL18A1-205ENST00000423214 AAASQ9NRG9 546 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 PCDHA10Q9Y5I2 948 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 SNX14Q9Y5W7 946 aa18.29■□□□□ 0.52
COL18A1-205ENST00000423214 TBKBP1A7MCY6 615 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 WDR64B1ANS9 1081 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 VTNP04004 478 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 DNAJB1P25685 340 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 HSPA4P34932 840 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 CRYBB1P53674 252 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-205ENST00000423214 PKN1Q16512 942 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 SLC24A5Q71RS6 500 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 SPPL3Q8TCT6 385 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms