RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 SCN10AQ9Y5Y9 1956 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 PP2D1A8MPX8 630 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 HAS3O00219 553 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 GAS2O43903 313 aaKnown RBP11.12□□□□□ -0.63
HDLBP-209ENST00000422933 MED24O75448 989 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 KRT18P05783 430 aaKnown RBP11.12□□□□□ -0.63
HDLBP-209ENST00000422933 INSRRP14616 1297 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 RFC5P40937 340 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 ATN1P54259 1190 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-209ENST00000422933 PSMC6P62333 389 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-209ENST00000422933 CDC42EP1Q00587 391 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 GRIK4Q16099 956 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 MTERF2Q49AM1 385 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 SPECC1Q5M775 1068 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 HYIQ5T013 277 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 RESP18Q5W5W9 173 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 KANK3Q6NY19 840 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 SESTD1Q86VW0 696 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 TCP11Q8WWU5 503 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 KAT2BQ92831 832 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 EPSTI1Q96J88 318 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 PCYT2Q99447 389 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
HDLBP-209ENST00000422933 RNPEPQ9H4A4 650 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 MAGEF1Q9HAY2 307 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 KCNG1Q9UIX4 513 aa11.12□□□□□ -0.63
HDLBP-209ENST00000422933 M0QZ92 97 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
HDLBP-209ENST00000422933 DGAT1O75907 488 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 EYA4O95677 639 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 SPATA31C1P0DKV0 1188 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 SYKP43405 635 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 UBE2HP62256 183 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 KARSQ15046 597 aaKnown RBP11.11□□□□□ -0.63
HDLBP-209ENST00000422933 PTGISQ16647 500 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 UGCGQ16739 394 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 AXDND1Q5T1B0 1012 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-209ENST00000422933 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 METTL13Q8N6R0 699 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 PDILTQ8N807 584 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 MCPH1Q8NEM0 835 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 PIGOQ8TEQ8 1089 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 LARP4BQ92615 738 aaKnown RBP11.11□□□□□ -0.63
HDLBP-209ENST00000422933 MAP7D2Q96T17 732 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 PLIN2Q99541 437 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 CYP26B1Q9NR63 512 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 SETD4Q9NVD3 440 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 KCND2Q9NZV8 630 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 HDAC6Q9UBN7 1215 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 KCNH3Q9ULD8 1083 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
HDLBP-209ENST00000422933 POLR2DO15514 142 aaKnown RBP11.1□□□□□ -0.63
HDLBP-209ENST00000422933 ZNF862O60290 1169 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
HDLBP-209ENST00000422933 KINO60870 393 aaKnown RBP11.1□□□□□ -0.63
HDLBP-209ENST00000422933 CYP2C9P11712 490 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 COL6A1P12109 1028 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 PLCG1P19174 1290 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 KLRC1P26715 233 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 GRIN1Q05586 938 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 BFSP2Q13515 415 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 NME8Q8N427 588 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 TMEM87AQ8NBN3 555 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
HDLBP-209ENST00000422933 TOX2Q96NM4 488 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 MTRQ99707 1265 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 TIPINQ9BVW5 301 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 BHMT2Q9H2M3 363 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 TELO2Q9Y4R8 837 aa11.1□□□□□ -0.63
HDLBP-209ENST00000422933 EVPLQ92817 2033 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 TRIP12Q14669 1992 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-209ENST00000422933 A0A1B0GVL5 298 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 SMIM35A0A1B0GVV1 85 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 E9PMD0 336 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 ASAP2O43150 1006 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 PFKFB1P16118 471 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 ATP4AP20648 1035 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 RTP1P59025 263 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 PTK7Q13308 1070 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 GRB10Q13322 594 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 DHX8Q14562 1220 aaKnown RBP11.09□□□□□ -0.63
HDLBP-209ENST00000422933 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 EFCAB12Q6NXP0 572 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 PADI6Q6TGC4 694 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 ANO5Q75V66 913 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms