RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 CEP89Q96ST8 783 aa20.29■□□□□ 0.84
PAX3-208ENST00000409828 JPH2Q9BR39 696 aaPredicted RBP20.29■□□□□ 0.84
PAX3-208ENST00000409828 CCSER1Q9C0I3 900 aa20.29■□□□□ 0.84
PAX3-208ENST00000409828 SCAND2PQ9GZW5 306 aaPredicted RBP20.29■□□□□ 0.84
PAX3-208ENST00000409828 NT5C3AQ9H0P0 336 aa20.29■□□□□ 0.84
PAX3-208ENST00000409828 CHMP5Q9NZZ3 219 aa20.29■□□□□ 0.84
PAX3-208ENST00000409828 DBR1Q9UK59 544 aaKnown RBP20.29■□□□□ 0.84
PAX3-208ENST00000409828 LTBP2Q14767 1821 aa20.28■□□□□ 0.84
PAX3-208ENST00000409828 SMIM35A0A1B0GVV1 85 aa20.28■□□□□ 0.84
PAX3-208ENST00000409828 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
PAX3-208ENST00000409828 MARCKSP29966 332 aaPredicted RBP20.28■□□□□ 0.84
PAX3-208ENST00000409828 UBA7P41226 1012 aa20.28■□□□□ 0.84
PAX3-208ENST00000409828 MTHFD1LQ6UB35 978 aa20.28■□□□□ 0.84
PAX3-208ENST00000409828 MMTAG2Q9BU76 263 aaKnown RBP20.28■□□□□ 0.84
PAX3-208ENST00000409828 NOC4LQ9BVI4 516 aaKnown RBP20.28■□□□□ 0.84
PAX3-208ENST00000409828 CYP26B1Q9NR63 512 aa20.28■□□□□ 0.84
PAX3-208ENST00000409828 SEPT9Q9UHD8 586 aaPredicted RBP20.28■□□□□ 0.84
PAX3-208ENST00000409828 TANC1Q9C0D5 1861 aa20.27■□□□□ 0.84
PAX3-208ENST00000409828 PARNO95453 639 aaKnown RBP20.27■□□□□ 0.84
PAX3-208ENST00000409828 C22orf31O95567 290 aa20.27■□□□□ 0.84
PAX3-208ENST00000409828 TIMP1P01033 207 aa20.27■□□□□ 0.84
PAX3-208ENST00000409828 KLRC1P26715 233 aa20.27■□□□□ 0.84
PAX3-208ENST00000409828 ZNF200P98182 395 aaPredicted RBP20.27■□□□□ 0.84
PAX3-208ENST00000409828 TRIM71Q2Q1W2 868 aaKnown RBP20.27■□□□□ 0.84
PAX3-208ENST00000409828 NME8Q8N427 588 aa20.27■□□□□ 0.84
PAX3-208ENST00000409828 PPP1R13LQ8WUF5 828 aa20.27■□□□□ 0.84
PAX3-208ENST00000409828 IGKV6-21A0A0C4DH24 114 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 TRIM43BA6NCK2 446 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 GAS2O43903 313 aaKnown RBP20.26■□□□□ 0.83
PAX3-208ENST00000409828 RFC5P40937 340 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 IGBP1P78318 339 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 GRIN1Q05586 938 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 TBC1D8BQ0IIM8 1120 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 RSPH3Q86UC2 560 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 LINC01465Q8N7H1 131 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 RETREG2Q8NC44 543 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 DHX38Q92620 1227 aaKnown RBP20.26■□□□□ 0.83
PAX3-208ENST00000409828 TRIM43Q96BQ3 446 aaPredicted RBP20.26■□□□□ 0.83
PAX3-208ENST00000409828 CSRNP2Q9H175 543 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 HIPK3Q9H422 1215 aa20.26■□□□□ 0.83
PAX3-208ENST00000409828 PP2D1A8MPX8 630 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 CUTAO60888 179 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 MAFO75444 373 aaPredicted RBP20.25■□□□□ 0.83
PAX3-208ENST00000409828 CYP2C9P11712 490 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 RAG1P15918 1043 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 CDC25AP30304 524 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 RARRES1P49788 294 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 FOXD4L6Q3SYB3 417 aaPredicted RBP20.25■□□□□ 0.83
PAX3-208ENST00000409828 FOXD4L3Q6VB84 417 aaPredicted RBP20.25■□□□□ 0.83
PAX3-208ENST00000409828 SH3RF1Q7Z6J0 888 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 CABP7Q86V35 215 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 LEO1Q8WVC0 666 aaPredicted RBP20.25■□□□□ 0.83
PAX3-208ENST00000409828 TRAPPC12Q8WVT3 735 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 CALML4Q96GE6 196 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 CEP170P1Q96L14 293 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 DHX33Q9H6R0 707 aaKnown RBP20.25■□□□□ 0.83
PAX3-208ENST00000409828 PRDM5Q9NQX1 630 aaPredicted RBP20.25■□□□□ 0.83
PAX3-208ENST00000409828 KIAA1024Q9UPX6 916 aa20.25■□□□□ 0.83
PAX3-208ENST00000409828 DGAT1O75907 488 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 TMOD1P28289 359 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 TXLNAP40222 546 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 ECM1Q16610 540 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 MTERF2Q49AM1 385 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 TMEM119Q4V9L6 283 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 XKR9Q5GH70 373 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 FAM26DQ5JW98 314 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 MFSD5Q6N075 450 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 POTEGQ6S5H5 508 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 SLC7A3Q8WY07 619 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 SPATA32Q96LK8 384 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 DNM3Q9UQ16 869 aa20.24■□□□□ 0.83
PAX3-208ENST00000409828 EYA4O95677 639 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 CKBP12277 381 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 SELPP16109 830 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 RFC2P35250 354 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 GRB10Q13322 594 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 AXDND1Q5T1B0 1012 aaPredicted RBP20.23■□□□□ 0.83
PAX3-208ENST00000409828 FAM43BQ6ZT52 329 aaPredicted RBP20.23■□□□□ 0.83
PAX3-208ENST00000409828 TRMT1LQ7Z2T5 733 aaKnown RBP20.23■□□□□ 0.83
PAX3-208ENST00000409828 PIGOQ8TEQ8 1089 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 CDK5RAP3Q96JB5 506 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 CLIC6Q96NY7 704 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 PNMA5Q96PV4 448 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
PAX3-208ENST00000409828 CCDC39Q9UFE4 941 aa20.23■□□□□ 0.83
PAX3-208ENST00000409828 TMEM150BA6NC51 233 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 ZBTB39O15060 712 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 IQCF3P0C7M6 154 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 ME1P48163 572 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 DNM2P50570 870 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 NPEPPSP55786 919 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 IER5Q5VY09 327 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 PLA2G4FQ68DD2 849 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 EFCAB12Q6NXP0 572 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 RUFY4Q6ZNE9 571 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 KIAA0319LQ8IZA0 1049 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 TMEM199Q8N511 208 aa20.22■□□□□ 0.83
PAX3-208ENST00000409828 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
PAX3-208ENST00000409828 WNT8BQ93098 351 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms