RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TAF3Q5VWG9 929 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 IRF2BP2Q7Z5L9 587 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 SLC35C1Q96A29 364 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 ZBTB9Q96C00 473 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 WDR11Q9BZH6 1224 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 PARVGQ9HBI0 331 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 ZMYM2Q9UBW7 1377 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 BTNL10A8MVZ5 291 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 TGFB1I1O43294 461 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 NMT1P30419 496 aaKnown RBP18.44■□□□□ 0.54
NUP50-203ENST00000407019 MATR3P43243 847 aaKnown RBP eCLIP18.44■□□□□ 0.54
NUP50-203ENST00000407019 PTK2Q05397 1052 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 NFIL3Q16649 462 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 ZNF577Q9BSK1 485 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 PACSIN1Q9BY11 444 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 VEZTQ9HBM0 779 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 PCDHB13Q9Y5F0 798 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 UBE4BO95155 1302 aa18.44■□□□□ 0.54
NUP50-203ENST00000407019 GTPBP10A4D1E9 387 aaKnown RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 TBC1D12O60347 775 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 FTCDO95954 541 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 LMAN1P49257 510 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 ZNF571Q7Z3V5 609 aaPredicted RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 AENQ8WTP8 325 aaKnown RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 NACC1Q96RE7 527 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 UNC45AQ9H3U1 944 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 SIX2Q9NPC8 291 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 GCNT4Q9P109 453 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 SEL1LQ9UBV2 794 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 FEM1BQ9UK73 627 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 PPP1R12BO60237 982 aaPredicted RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 ANXA13P27216 316 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 POLD1P28340 1107 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 PSMC2P35998 433 aaKnown RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 PRKCIP41743 596 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 MEI1Q5TIA1 1274 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 STXBP4Q6ZWJ1 553 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 FAM186BQ8IYM0 893 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 LARGE2Q8N3Y3 721 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 HDAC7Q8WUI4 952 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 BORCS6Q96GS4 357 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 TEKT3Q9BXF9 490 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 DMGDHQ9UI17 866 aaKnown RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
NUP50-203ENST00000407019 SMCHD1A6NHR9 2005 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 MYH10P35580 1976 aa18.43■□□□□ 0.54
NUP50-203ENST00000407019 ZBTB39O15060 712 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 FKBP1CQ5VVH2 108 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 C8orf74Q6P047 294 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 GDAP1L1Q96MZ0 367 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 PSMD1Q99460 953 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 RBM12Q9NTZ6 932 aaKnown RBP18.42■□□□□ 0.54
NUP50-203ENST00000407019 KCND2Q9NZV8 630 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 ZC3H4Q9UPT8 1303 aaKnown RBP18.42■□□□□ 0.54
NUP50-203ENST00000407019 GRID2IPA4D2P6 1211 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 PHACTR2O75167 634 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 ARP10275 920 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 CAP2P40123 477 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 ZNF131P52739 623 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 JAM2P57087 298 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 ZC2HC1CQ53FD0 456 aaPredicted RBP18.42■□□□□ 0.54
NUP50-203ENST00000407019 GLE1Q53GS7 698 aaKnown RBP18.42■□□□□ 0.54
NUP50-203ENST00000407019 MIGA2Q7L4E1 593 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 TTLL6Q8N841 843 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 RBM46Q8TBY0 533 aaKnown RBP18.42■□□□□ 0.54
NUP50-203ENST00000407019 MS4A14Q96JA4 679 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 MKNK1Q9BUB5 465 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 TMEM39BQ9GZU3 492 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 STK32BQ9NY57 414 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 CALCOCO1Q9P1Z2 691 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 STIM2Q9P246 746 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 ODF2LQ9ULJ1 636 aa18.42■□□□□ 0.54
NUP50-203ENST00000407019 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
NUP50-203ENST00000407019 SYF2O95926 243 aaKnown RBP18.41■□□□□ 0.54
NUP50-203ENST00000407019 SLC7A5Q01650 507 aa18.41■□□□□ 0.54
NUP50-203ENST00000407019 CDAN1Q8IWY9 1227 aa18.41■□□□□ 0.54
NUP50-203ENST00000407019 FAM178BQ8IXR5 827 aa18.41■□□□□ 0.54
NUP50-203ENST00000407019 ZFP91Q96JP5 570 aaPredicted RBP18.41■□□□□ 0.54
NUP50-203ENST00000407019 FIZ1Q96SL8 496 aa18.41■□□□□ 0.54
NUP50-203ENST00000407019 FBXO28Q9NVF7 368 aa18.41■□□□□ 0.54
NUP50-203ENST00000407019 WRAP73Q9P2S5 460 aaPredicted RBP18.41■□□□□ 0.54
NUP50-203ENST00000407019 AJAP1Q9UKB5 411 aaPredicted RBP18.41■□□□□ 0.54
NUP50-203ENST00000407019 ATP8B3O60423 1300 aa18.41■□□□□ 0.54
NUP50-203ENST00000407019 RNF40O75150 1001 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 FLOT1O75955 427 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 IFI16Q16666 785 aaKnown RBP18.4■□□□□ 0.54
NUP50-203ENST00000407019 HS2ST1Q7LGA3 356 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 ZNF720Q7Z2F6 126 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 VPS36Q86VN1 386 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 HINFPQ9BQA5 517 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 MXRA8Q9BRK3 442 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 IKZF4Q9H2S9 585 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 NAGPAQ9UK23 515 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms