RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 ZNF609O15014 1411 aa5.39□□□□□ -1.55
HDAC9-204ENST00000406451 POTEB3A0JP26 581 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SFI1A8K8P3 1242 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTECB2RU33 542 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 KIF28PB7ZC32 967 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 VEGFAP15692 232 aaPredicted RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 GPC3P51654 580 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTEBQ6S5H4 581 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTEDQ86YR6 584 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RPGRIP1Q96KN7 1286 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 GBA2Q9HCG7 927 aaPredicted RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 DONSONQ9NYP3 566 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTEFA5A3E0 1075 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTEIP0CG38 1075 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 VPS41P49754 854 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 CUL4AQ13619 759 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 KYAT1Q16773 422 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTEGQ6S5H5 508 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 POTEEQ6S8J3 1075 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RUFY4Q6ZNE9 571 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 CYFIP1Q7L576 1253 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 XXYLT1Q8NBI6 393 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 VIMP08670 466 aaKnown RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 LMNB2Q03252 620 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RESTQ13127 1097 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 TOB2Q14106 344 aaPredicted RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 CCDC121Q6ZUS5 278 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SMARCAD1Q9H4L7 1026 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 UBR1Q8IWV7 1749 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 HEXIM1O94992 359 aaKnown RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 ATF2P15336 505 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 STAT5BP51692 787 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 EFNA5P52803 228 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 BAATQ14032 418 aaPredicted RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SFR1Q86XK3 245 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RAD54LQ92698 747 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SEL1LQ9UBV2 794 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SCAF8Q9UPN6 1271 aaKnown RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 ZNF148Q9UQR1 794 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RASSF7Q02833 373 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SGMS1Q86VZ5 419 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 KCTD6Q8NC69 237 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 CHST13Q8NET6 341 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 ERO1AQ96HE7 468 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 MCF2LO15068 1137 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 GGPS1O95749 300 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RESP18Q5W5W9 173 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 CCNYQ8ND76 341 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 UBE2Q2LH0YL09 131 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 NR3C1P04150 777 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 GBP1P32455 592 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 EPN1Q9Y6I3 576 aaPredicted RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 PASKQ96RG2 1323 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 LARGE1O95461 756 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 TSTA3Q13630 321 aaPredicted RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 EFCAB13Q8IY85 973 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 STAG2Q8N3U4 1231 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 BBOF1Q8ND07 529 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 TTC1Q99614 292 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 EIF2AK1Q9BQI3 630 aaKnown RBP5.38□□□□□ -1.55
HDAC9-204ENST00000406451 VPS18Q9P253 973 aa5.38□□□□□ -1.55
HDAC9-204ENST00000406451 GPR75-ASB3A0A0A6YYF3 556 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 RECQLP46063 649 aaPredicted RBP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 DPCR1Q3MIW9 517 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 SCFD2Q8WU76 684 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 PRPF31Q8WWY3 499 aaKnown RBP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 HAUS4Q9H6D7 363 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 MAD1L1Q9Y6D9 718 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 NWD1Q149M9 1564 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 VWDEQ8N2E2 1590 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 DYNC1LI2O43237 492 aaPredicted RBP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 SLC4A1P02730 911 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 KRT1P04264 644 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 S100BP04271 92 aaPredicted RBP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 CPT1AP50416 773 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 VEPH1Q14D04 833 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 ERO1BQ86YB8 467 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 PARD3BQ8TEW8 1205 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 PKNOX2Q96KN3 472 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 NCAPGQ9BPX3 1015 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 CALN1Q9BXU9 219 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 MAP3K20Q9NYL2 800 aaKnown RBP5.37□□□□□ -1.55
HDAC9-204ENST00000406451 POLLQ9UGP5 575 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 IKBKBO14920 756 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 SRGNP10124 158 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 ZNF18P17022 549 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 CASP14P31944 242 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 RGS2P41220 211 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 ARHGEF18Q6ZSZ5 1173 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 RNF180Q86T96 592 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 TTC30AQ86WT1 665 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 CLEC10AQ8IUN9 316 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 TTC39CQ8N584 583 aa5.37□□□□□ -1.55
HDAC9-204ENST00000406451 FAM133AQ8N9E0 248 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms