RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ECM2O94769 699 aaPredicted RBP21.19■□□□□ 0.98
SHANK1-203ENST00000391813 USP17L8P0C7I0 530 aa21.19■□□□□ 0.98
SHANK1-203ENST00000391813 PDE1BQ01064 536 aa21.19■□□□□ 0.98
SHANK1-203ENST00000391813 SNX1Q13596 522 aa21.19■□□□□ 0.98
SHANK1-203ENST00000391813 GADL1Q6ZQY3 521 aa21.19■□□□□ 0.98
SHANK1-203ENST00000391813 TRIML2Q8N7C3 387 aa21.19■□□□□ 0.98
SHANK1-203ENST00000391813 CLRN2A0PK11 232 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 SGK1O00141 431 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 HNRNPCL1O60812 293 aaKnown RBP21.18■□□□□ 0.98
SHANK1-203ENST00000391813 PPP2R5DQ14738 602 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 SHC4Q6S5L8 630 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 MRPL47Q9HD33 250 aaKnown RBP21.18■□□□□ 0.98
SHANK1-203ENST00000391813 TUBE1Q9UJT0 475 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 KRT81Q14533 505 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 KAZNQ674X7 775 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 FOXP4Q8IVH2 680 aaPredicted RBP21.18■□□□□ 0.98
SHANK1-203ENST00000391813 MAP7D3Q8IWC1 876 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 MXD3Q9BW11 206 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 IREB2P48200 963 aaKnown RBP21.18■□□□□ 0.98
SHANK1-203ENST00000391813 CENPUQ71F23 418 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 CCDC125Q86Z20 511 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 NUDCD1Q96RS6 583 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 PI4KBQ9UBF8 816 aa21.18■□□□□ 0.98
SHANK1-203ENST00000391813 ARHGAP10A1A4S6 786 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 LRRC53A6NM62 1247 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 TRPA1O75762 1119 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 PRCPP42785 496 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 NFIXQ14938 502 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 PDZD8Q8NEN9 1154 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 LRRC1Q9BTT6 524 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.17■□□□□ 0.98
SHANK1-203ENST00000391813 LIMA1Q9UHB6 759 aaKnown RBP21.17■□□□□ 0.98
SHANK1-203ENST00000391813 ZFP69BQ9UJL9 534 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 TTC36A6NLP5 189 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 CDR2Q01850 454 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 UNC13DQ70J99 1090 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 PPWD1Q96BP3 646 aaKnown RBP21.17■□□□□ 0.98
SHANK1-203ENST00000391813 PAGR1Q9BTK6 254 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 IQANK1A0A1B0GTG1 560 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 RASA4BC9J798 803 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 RASA4O43374 803 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 IGKV5-2P06315 115 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 CDC37Q16543 378 aaPredicted RBP21.17■□□□□ 0.98
SHANK1-203ENST00000391813 ODR4Q5SWX8 454 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 BSPRYQ5W0U4 402 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 TEX9Q8N6V9 391 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 TC2NQ8N9U0 490 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 SLC17A8Q8NDX2 589 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 CCDC68Q9H2F9 335 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 ZBTB12Q9Y330 459 aaPredicted RBP21.17■□□□□ 0.98
SHANK1-203ENST00000391813 HAUS5O94927 633 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 FAM107AO95990 144 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 KRT3P12035 628 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 CCND1P24385 295 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 CNGA1P29973 690 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 HDLBPQ00341 1268 aaKnown RBP21.17■□□□□ 0.98
SHANK1-203ENST00000391813 CRYMQ14894 314 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 USH1GQ495M9 461 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 MAD1L1Q9Y6D9 718 aa21.17■□□□□ 0.98
SHANK1-203ENST00000391813 P4HA1P13674 534 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 SATB1Q01826 763 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 RASGRP4Q8TDF6 673 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 SGSM3Q96HU1 749 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 UIMC1Q96RL1 719 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 GJB4Q9NTQ9 266 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 HAUS2Q9NVX0 235 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 PRPF6O94906 941 aaKnown RBP21.16■□□□□ 0.98
SHANK1-203ENST00000391813 FAM47EQ6ZV65 393 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 GFM2Q969S9 779 aaKnown RBP21.16■□□□□ 0.98
SHANK1-203ENST00000391813 FBXL5Q9UKA1 691 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 PVALEFA0A1B0GWK0 134 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 BRAFP15056 766 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 KCNV2Q8TDN2 545 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 NRBF2Q96F24 287 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 ARL2BPQ9Y2Y0 163 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 CHRNA3P32297 505 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 KLC1Q07866 573 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 SLC20A2Q08357 652 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 FBXO11Q86XK2 927 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 TEX2Q8IWB9 1127 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 PDIK1LQ8N165 341 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 TBCKQ8TEA7 893 aa21.16■□□□□ 0.98
SHANK1-203ENST00000391813 RINT1Q6NUQ1 792 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 CXorf38Q8TB03 319 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 PIP4K2CQ8TBX8 421 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 CCDC127Q96BQ5 260 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 FAM96AQ9H5X1 160 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 DDX39AO00148 427 aaKnown RBP21.15■□□□□ 0.98
SHANK1-203ENST00000391813 PSMD14O00487 310 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 RANBP1P43487 201 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 PDCD2Q16342 344 aaPredicted RBP21.15■□□□□ 0.98
SHANK1-203ENST00000391813 EPM2AIP1Q7L775 607 aaPredicted RBP21.15■□□□□ 0.98
SHANK1-203ENST00000391813 CEP70Q8NHQ1 597 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 TRAIPQ9BWF2 469 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 APOEP02649 317 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 OSBPP22059 807 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 METTL16Q86W50 562 aaKnown RBP21.15■□□□□ 0.98
SHANK1-203ENST00000391813 C3orf20Q8ND61 904 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 IL17RAQ96F46 866 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms