RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GH2P01242 217 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 KRT14P02533 472 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 CYP3A4P08684 503 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 BMP3P12645 472 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 C10orf76Q5T2E6 689 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 ALKBH5Q6P6C2 394 aaKnown RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 BTNL9Q6UXG8 535 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 SPICE1Q8N0Z3 855 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 PIGOQ8TEQ8 1089 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 IFT81Q8WYA0 676 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 WDR18Q9BV38 432 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 OLFML3Q9NRN5 406 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 FBXL5Q9UKA1 691 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 RABGAP1Q9Y3P9 1069 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 BZW2Q9Y6E2 419 aaKnown RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 GRIN2DO15399 1336 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 ZNF233A6NK53 670 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 GOLGA8KD6RF30 607 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 RAD51CO43502 376 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 KIF4AO95239 1232 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 HDLBPQ00341 1268 aaKnown RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 PPFIA1Q13136 1202 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 PTPROQ16827 1216 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 TCERG1LQ5VWI1 586 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 MASTLQ96GX5 879 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 PRR12Q9ULL5 1215 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 PIK3CDO00329 1044 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 KCNK3O14649 394 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 OPA1O60313 960 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 SLITRK3O94933 977 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 CTTNQ14247 550 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 GBP6Q6ZN66 633 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 OTOP1Q7RTM1 612 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 GCNT4Q9P109 453 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 MYH11P35749 1972 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 ANKRD65E5RJM6 399 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 DDX3XO00571 662 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST1-201ENST00000378043 CES2O00748 559 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 SLC16A3O15427 465 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 HSF2BPO75031 334 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 NMT1P30419 496 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 PDE6BP35913 854 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 ZC2HC1CQ53FD0 456 aaPredicted RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 C1orf186Q6ZWK4 172 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 MREGQ8N565 214 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 TPCN2Q8NHX9 752 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 SCFD2Q8WU76 684 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 CCDC43Q96MW1 224 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 FIZ1Q96SL8 496 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 METTL14Q9HCE5 456 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 ATRNL1Q5VV63 1379 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 ECE2O60344 883 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 MMP10P09238 476 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 RPL13P26373 211 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 GUCY2FP51841 1108 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 FKBP1AP62942 108 aaKnown RBP11.95□□□□□ -0.5
BEST1-201ENST00000378043 PAK2Q13177 524 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 KSR1Q8IVT5 923 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 KLHL7Q8IXQ5 586 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 SH2D3CQ8N5H7 860 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 CAPS2Q9BXY5 557 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
BEST1-201ENST00000378043 GTPBP10A4D1E9 387 aaKnown RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 PSMD10O75832 226 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 ECHS1P30084 290 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 ECE1P42892 770 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 NOP2P46087 812 aaKnown RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 COG2Q14746 738 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 SLC15A2Q16348 729 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 KCTD19Q17RG1 926 aaPredicted RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 SKIDA1Q1XH10 827 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 DNAJC21Q5F1R6 531 aaKnown RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 TTC19Q6DKK2 380 aaPredicted RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 SLFN11Q7Z7L1 901 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 METTL13Q8N6R0 699 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 ZNF622Q969S3 477 aaKnown RBP eCLIP11.94□□□□□ -0.5
BEST1-201ENST00000378043 WRAP73Q9P2S5 460 aaPredicted RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 ZNF76P36508 570 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 SLC20A2Q08357 652 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 KCTD16Q68DU8 428 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 TPH2Q8IWU9 490 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 ACTRT1Q8TDG2 376 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
BEST1-201ENST00000378043 STXBP5LQ9Y2K9 1186 aa11.94□□□□□ -0.5
BEST1-201ENST00000378043 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
BEST1-201ENST00000378043 EIF3HO15372 352 aaKnown RBP eCLIP11.93□□□□□ -0.5
BEST1-201ENST00000378043 FLOT1O75955 427 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms