RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 BCCIPQ9P287 314 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLN5-201ENST00000377453 ZNF219Q9P2Y4 722 aaPredicted RBP22.24■■□□□ 1.15
CLN5-201ENST00000377453 RNF14Q9UBS8 474 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 MYH4Q9Y623 1939 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 SART1O43290 800 aaKnown RBP22.24■■□□□ 1.15
CLN5-201ENST00000377453 LSP1P33241 339 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 HSD17B3P37058 310 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 CERKLQ49MI3 558 aaPredicted RBP22.24■■□□□ 1.15
CLN5-201ENST00000377453 COA1Q9GZY4 146 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 DPH5Q9H2P9 285 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 TRAF3IP3Q9Y228 551 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 IGSF9BQ9UPX0 1349 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 TAF1LQ8IZX4 1826 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 SRCAPQ6ZRS2 3230 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 POLRMTO00411 1230 aaKnown RBP22.23■■□□□ 1.15
CLN5-201ENST00000377453 EFCAB13Q8IY85 973 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 TAF1DQ9H5J8 278 aaPredicted RBP22.23■■□□□ 1.15
CLN5-201ENST00000377453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.23■■□□□ 1.15
CLN5-201ENST00000377453 G3V3G9 751 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 OPLAHO14841 1288 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 DAPK3O43293 454 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 ZBTB48P10074 688 aaPredicted RBP22.23■■□□□ 1.15
CLN5-201ENST00000377453 CRKP46108 304 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 DCAF8Q5TAQ9 597 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 PEX26Q7Z412 305 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 FRMD5Q7Z6J6 570 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 DAAM2Q86T65 1068 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 GLYCTKQ8IVS8 523 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 LNX1Q8TBB1 728 aaPredicted RBP22.23■■□□□ 1.15
CLN5-201ENST00000377453 CRYGNQ8WXF5 182 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 TEKT1Q969V4 418 aa22.23■■□□□ 1.15
CLN5-201ENST00000377453 CYP3A7-CYP3A51PA0A087WV96 503 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 TGFB1I1O43294 461 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 TRIM37O94972 964 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 TRIM49P0CI25 452 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 TRIM49CP0CI26 452 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 CYP3A7P24462 503 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 RPA1P27694 616 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 PLS1Q14651 629 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 SLFN12Q8IYM2 578 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 PLCD3Q8N3E9 789 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 SCFD2Q8WU76 684 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 PITPNM2Q9BZ72 1349 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 F5H6K3 240 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 KRIT1O00522 736 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 TTI1O43156 1089 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 ICA1Q05084 483 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 KLRC3Q07444 240 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 MBOAT7Q96N66 472 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 EIF2AK1Q9BQI3 630 aaKnown RBP22.22■■□□□ 1.15
CLN5-201ENST00000377453 TRIM51Q9BSJ1 452 aa22.22■■□□□ 1.15
CLN5-201ENST00000377453 CHORDC1Q9UHD1 332 aaPredicted RBP22.22■■□□□ 1.15
CLN5-201ENST00000377453 SMCHD1A6NHR9 2005 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 SPDYE3A6NKU9 549 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 LRRN2O75325 713 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 HOXA10P31260 410 aaPredicted RBP22.21■■□□□ 1.15
CLN5-201ENST00000377453 RDH13Q8NBN7 331 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 ATP6V1G3Q96LB4 118 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 A0A087WUV0 522 aaPredicted RBP22.21■■□□□ 1.15
CLN5-201ENST00000377453 DCDC2CA8MYV0 355 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 TBCAO75347 108 aaKnown RBP22.21■■□□□ 1.15
CLN5-201ENST00000377453 NDUFB10O96000 172 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 GALCP54803 685 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 HDLBPQ00341 1268 aaKnown RBP22.21■■□□□ 1.15
CLN5-201ENST00000377453 KDM7AQ6ZMT4 941 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 PPP4R3CPQ6ZMV5 832 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 ARHGAP27Q6ZUM4 889 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 PALB2Q86YC2 1186 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 TPH2Q8IWU9 490 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 UBLCP1Q8WVY7 318 aaPredicted RBP22.21■■□□□ 1.15
CLN5-201ENST00000377453 PPANQ9NQ55 473 aaKnown RBP22.21■■□□□ 1.15
CLN5-201ENST00000377453 PLCB1Q9NQ66 1216 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 TAS2R14Q9NYV8 317 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 FAM198AQ9UFP1 575 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 VAV3Q9UKW4 847 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 FOCADQ5VW36 1801 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 MYO3BQ8WXR4 1341 aa22.21■■□□□ 1.15
CLN5-201ENST00000377453 CALUO43852 315 aaPredicted RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 EVI5O60447 810 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 TMOD1P28289 359 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 ZNF76P36508 570 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 CYP2J2P51589 502 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 PRPF4BQ13523 1007 aaKnown RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 OLIG1Q8TAK6 271 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 ISCUQ9H1K1 167 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 SEPT11Q9NVA2 429 aaKnown RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 FBXL5Q9UKA1 691 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 PGRMC1O00264 195 aaKnown RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 ERLIN2O94905 339 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 H2AFZP0C0S5 128 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 HSPA9P38646 679 aaKnown RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 JAM2P57087 298 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 ZNF211Q13398 564 aaPredicted RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 RRP1BQ14684 758 aaKnown RBP22.2■■□□□ 1.14
CLN5-201ENST00000377453 AADACL2Q6P093 401 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 H2AFVQ71UI9 128 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 FBXO11Q86XK2 927 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 SP8Q8IXZ3 490 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 MYCT1Q8N699 235 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 BANK1Q8NDB2 785 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms