RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 MAEAQ7L5Y9 396 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 TPH2Q8IWU9 490 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 FBXL16Q8N461 479 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 ATP2A3Q93084 1043 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 NAF1Q96HR8 494 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 A1CFQ9NQ94 594 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 FGFR4P22455 802 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 LTKP29376 864 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 FOXO4P98177 505 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 MYL7Q01449 175 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 CREG2Q8IUH2 290 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 TRIM42Q8IWZ5 723 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 RSAD2Q8WXG1 361 aa9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 DBR1Q9UK59 544 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-201ENST00000377327 SPAG7O75391 227 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 INHBAP08476 426 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 PLA2G4BP0C869 781 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 MYBL2P10244 700 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 GNAT1P11488 350 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 BMP6P22004 513 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 MAPK4P31152 587 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 RFX5P48382 616 aaPredicted RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 USP11P51784 963 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 CCDC137Q6PK04 289 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 MIER3Q7Z3K6 550 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 PPP4R1Q8TF05 950 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 KAZALD1Q96I82 304 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 ZBTB21Q9ULJ3 1066 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 LEMD3Q9Y2U8 911 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 FAM237AA0A1B0GTK4 181 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 LRRC10BA6NIK2 292 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 SRRM3A6NNA2 597 aaPredicted RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 PDE2AO00408 941 aaPredicted RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 MT-ND3P03897 115 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 KCNA3P22001 575 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 PRR16Q569H4 304 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 ERP27Q96DN0 273 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 SETDB2Q96T68 719 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 DCTN4Q9UJW0 460 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 EXOC7Q9UPT5 735 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 CAV1Q03135 178 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 SLC29A2Q14542 456 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 CEP70Q8NHQ1 597 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 ERP44Q9BS26 406 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 FAM129AQ9BZQ8 928 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 F8W031 263 aaPredicted RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 TRAPPC3O43617 180 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 HNRNPCL1O60812 293 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 PRPF6O94906 941 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 FAM153BP0C7A2 387 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 AMPD2Q01433 879 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 GRAMD1BQ3KR37 738 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 FAM153CQ494X1 144 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 KAZNQ674X7 775 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 DGKHQ86XP1 1220 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 RFFLQ8WZ73 363 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 HPS3Q969F9 1004 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 TTC1Q99614 292 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 CELF4Q9BZC1 486 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 PABPC3Q9H361 631 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 FAM153AQ9UHL3 310 aa9.75□□□□□ -0.85
CRNKL1-201ENST00000377327 XDHP47989 1333 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 MYO3AQ8NEV4 1616 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 TMEM120BA0PK00 339 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 CFAP69A5D8W1 941 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 ZSCAN5CA6NGD5 496 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 UBE2Q2LH0YL09 131 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 CHRNDQ07001 517 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 ANKRD27Q96NW4 1050 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 MXD3Q9BW11 206 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 SHOX2O60902 331 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 UBOX5O94941 541 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 C7orf25Q9BPX7 421 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 NDE1Q9NXR1 346 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 MCM8Q9UJA3 840 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 DNAJC12Q9UKB3 198 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 PITPNM2Q9BZ72 1349 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 NCAPD2Q15021 1401 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 HNRNPCP07910 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 PLS3P13797 630 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 SERPINB4P48594 390 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 AP2B1P63010 937 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 LAMB3Q13751 1172 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 TRMT10CQ7L0Y3 403 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 KAT2BQ92831 832 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 ROPN1BQ9BZX4 212 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 ROPN1Q9HAT0 212 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
CRNKL1-201ENST00000377327 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
CRNKL1-201ENST00000377327 FRMPD2Q68DX3 1309 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-201ENST00000377327 RNF8O76064 485 aa9.73□□□□□ -0.85
CRNKL1-201ENST00000377327 NSFP46459 744 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-201ENST00000377327 TPD52P55327 224 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-201ENST00000377327 CCDC14Q49A88 953 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms