RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 KRT81Q14533 505 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 HADHQ16836 314 aaKnown RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 FAM193BQ96PV7 902 aaPredicted RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 PPANQ9NQ55 473 aaKnown RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 TYW1Q9NV66 732 aaKnown RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 C3P01024 1663 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 CSPG5O95196 566 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 DPYDQ12882 1025 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 PTPAQ15257 358 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 KSR1Q8IVT5 923 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 PSPC1Q8WXF1 523 aaKnown RBP19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 RAB17Q9H0T7 212 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 NKIRAS1Q9NYS0 192 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 PROM2Q8N271 834 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 SPATA33Q96N06 139 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 NBPF3Q9H094 633 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 SLC37A4O43826 429 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 SFNP31947 248 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 MMP19Q99542 508 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 EYA4O95677 639 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 ZFPM1Q8IX07 1006 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 PLCD3Q8N3E9 789 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 RSAD2Q8WXG1 361 aa19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 RPF1Q9H9Y2 349 aaKnown RBP19.46■□□□□ 0.71
PTPDC1-202ENST00000375360 IQCA1LA6NCM1 817 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 SEC31AO94979 1220 aaKnown RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 FDX1P10109 184 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 RPS6P62753 249 aaKnown RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 NAALADL2Q58DX5 795 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 SLC9A2Q9UBY0 812 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 CAP2P40123 477 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 BRD3Q15059 726 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 LMBRD2Q68DH5 695 aaPredicted RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 MAP3K14Q99558 947 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 AGXT2Q9BYV1 514 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 NSRP1Q9H0G5 558 aaKnown RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 VPS37BQ9H9H4 285 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 SNX1Q13596 522 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 NBPF12Q5TAG4 269 aaPredicted RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 ZNF746Q6NUN9 644 aaPredicted RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 CEP63Q96MT8 703 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 JPH1Q9HDC5 661 aaPredicted RBP19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 TUBE1Q9UJT0 475 aa19.45■□□□□ 0.7
PTPDC1-202ENST00000375360 YWHABP31946 246 aaKnown RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 CTNNA1P35221 906 aaKnown RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 GFPT1Q06210 699 aaPredicted RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 ALCAMQ13740 583 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 RSPH3Q86UC2 560 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 ADSSL1Q8N142 457 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 REEP2Q9BRK0 252 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 SRGAP2O75044 1071 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 KRT15P19012 456 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 TTLL4Q14679 1199 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 KCNB1Q14721 858 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 CEP85LQ5SZL2 805 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 GGPS1O95749 300 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 TXNP10599 105 aaKnown RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 CCDC117Q8IWD4 279 aaPredicted RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 CTAGE3PQ8IX95 158 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 IRX2Q9BZI1 471 aaPredicted RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 NDUFAB1O14561 156 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 MYL3P08590 195 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 NPEPPSP55786 919 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 EVX2Q03828 476 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 C2orf54Q08AI8 447 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 SLC30A10Q6XR72 485 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 RBM46Q8TBY0 533 aaKnown RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 NEK9Q8TD19 979 aa19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 POLR3FQ9H1D9 316 aaPredicted RBP19.44■□□□□ 0.7
PTPDC1-202ENST00000375360 PLA2G4FQ68DD2 849 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 SLFN12LQ6IEE8 588 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 LRP10Q7Z4F1 713 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 ABI1Q8IZP0 508 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 RABGGTAQ92696 567 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 FAM205AQ6ZU69 1335 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 PKN1Q16512 942 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 ZNF568Q3ZCX4 644 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 EARS2Q5JPH6 523 aaKnown RBP19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 PASD1Q8IV76 773 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 MTRQ99707 1265 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 MTFR1LQ9H019 292 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 JRKLQ9Y4A0 524 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 ZC2HC1CQ53FD0 456 aaPredicted RBP19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 RUFY4Q6ZNE9 571 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 MAIP1Q8WWC4 291 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 TMEM143Q96AN5 459 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 EPB41L5Q9HCM4 733 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 STAT5BP51692 787 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 BFSP1Q12934 665 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 NAA30Q147X3 362 aaPredicted RBP19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 TAAR1Q96RJ0 339 aa19.43■□□□□ 0.7
PTPDC1-202ENST00000375360 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 CTNND1O60716 968 aaKnown RBP19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 EXOC8Q8IYI6 725 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 CHP1Q99653 195 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 SSX2IPQ9Y2D8 614 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 STK10O94804 968 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms