RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CCDC169A6NNP5 214 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 ABLIM1O14639 778 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 GBP1P32455 592 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 POLE2P56282 527 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 LRRC14Q15048 493 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 SGSM1Q2NKQ1 1148 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 SRBD1Q8N5C6 995 aaKnown RBP22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 RASGRP4Q8TDF6 673 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 RBM41Q96IZ5 413 aaKnown RBP22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 EDEM3Q9BZQ6 932 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 CCSER1Q9C0I3 900 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 CCDC113Q9H0I3 377 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 DOCK2Q92608 1830 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 TCP11X1B4DZS4 312 aa22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 GNAT2P19087 354 aa22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 SP100P23497 879 aaPredicted RBP22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 RFC5P40937 340 aa22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 PMS2P54278 862 aa22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 UBAP2Q5T6F2 1119 aaKnown RBP22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 UHMK1Q8TAS1 419 aaKnown RBP22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 PCMTD2Q9NV79 361 aa22.33■■□□□ 1.17
TMEFF1-201ENST00000374879 MINDY4BA8MYZ0 360 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 CALB2P22676 271 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 POLR2FP61218 127 aaKnown RBP22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 CUL3Q13618 768 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 TMTC3Q6ZXV5 915 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 FAM81AQ8TBF8 368 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 FBF1Q8TES7 1133 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 PABPC3Q9H361 631 aaKnown RBP22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 RNPEPL1Q9HAU8 725 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 CEP72Q9P209 647 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 FAM205AQ6ZU69 1335 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 CNTNAP5Q8WYK1 1306 aa22.33■■□□□ 1.16
TMEFF1-201ENST00000374879 RNASELQ05823 741 aaKnown RBP22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 TROAPQ12815 778 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 SLC29A2Q14542 456 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 SPDYCQ5MJ68 293 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 IFIT1BQ5T764 474 aaKnown RBP22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 DENND2CQ68D51 928 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 TBC1D16Q8TBP0 767 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 DLGAP2Q9P1A6 1054 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 PNPLA7Q6ZV29 1317 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 SLCO1A2P46721 670 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 LRRC57Q8N9N7 239 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 NEK9Q8TD19 979 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 MGARPQ8TDB4 240 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 ZSCAN10Q96SZ4 725 aaPredicted RBP22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 PAIP2Q9BPZ3 127 aaKnown RBP22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 RXFP1Q9HBX9 757 aa22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 CHCHD3Q9NX63 227 aaKnown RBP22.32■■□□□ 1.16
TMEFF1-201ENST00000374879 PEX5P50542 639 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 KLC1Q07866 573 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 PDIA5Q14554 519 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 APLFQ8IW19 511 aaPredicted RBP22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 ESR2Q92731 530 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 SYN2Q92777 582 aaPredicted RBP22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 C7orf25Q9BPX7 421 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 AGTP01019 485 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 SCG2P13521 617 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 PPP1R2P41236 205 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 POU5F1Q01860 360 aaKnown RBP22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 RAPGEF1Q13905 1077 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 DIXDC1Q155Q3 683 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 CNNM4Q6P4Q7 775 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 LONP2Q86WA8 852 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 PHC3Q8NDX5 983 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 EPS8L3Q8TE67 593 aaKnown RBP22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 RMDN2Q96LZ7 410 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 ETNK1Q9HBU6 452 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 NR2E1Q9Y466 385 aa22.31■■□□□ 1.16
TMEFF1-201ENST00000374879 PEX11AO75192 247 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 GJB6O95452 261 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 IGHMBP2P38935 993 aaKnown RBP22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 KLHL30Q0D2K2 578 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 CCDC152Q4G0S7 254 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 FAM133AQ8N9E0 248 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 DYDC1Q8WWB3 177 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 ZDHHC18Q9NUE0 388 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 ARL2BPQ9Y2Y0 163 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 TPBGLP0DKB5 382 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 DAAM2Q86T65 1068 aa22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 COL23A1Q86Y22 540 aaPredicted RBP22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 LSM14BQ9BX40 385 aaKnown RBP22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 DBR1Q9UK59 544 aaKnown RBP22.3■■□□□ 1.16
TMEFF1-201ENST00000374879 CCNB1P14635 433 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 C6orf118Q5T5N4 469 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 RASGEF1CQ8N431 466 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 FLT1P17948 1338 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 LRRC23Q53EV4 343 aaPredicted RBP22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 INTS5Q6P9B9 1019 aaKnown RBP22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 CABP7Q86V35 215 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 STK32AQ8WU08 396 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 KIFAP3Q92845 792 aa22.29■■□□□ 1.16
TMEFF1-201ENST00000374879 GM2AP17900 193 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 ANKLE1Q8NAG6 615 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 PIGOQ8TEQ8 1089 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 SDR42E1Q8WUS8 393 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 TRIM7Q9C029 511 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms