RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 PPWD1Q96BP3 646 aaKnown RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 CFAP36Q96G28 342 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 CHGBP05060 677 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 SRGNP10124 158 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 MX2P20592 715 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 DARS2Q6PI48 645 aaKnown RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 SFI1A8K8P3 1242 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 CYP2D6P10635 497 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 ECE1P42892 770 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 POLGP54098 1239 aaPredicted RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 NME8Q8N427 588 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 KMT5AQ9NQR1 393 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 AGPAT5Q9NUQ2 364 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 CAV1Q03135 178 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 LRRC31Q6UY01 552 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 GLG1Q92896 1179 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 TTC17Q96AE7 1141 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 DYDC2Q96IM9 177 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 HNRNPH1P31943 449 aaKnown RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 BRDTQ58F21 947 aaPredicted RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 SFR1Q86XK3 245 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 PDIK1LQ8N165 341 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 GOLGA8QA0A0J9YX86 632 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 GOLGA8OA6NCC3 632 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 A6NJR5 290 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 TTC36A6NLP5 189 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 GOLGA8NF8WBI6 632 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 NCF2P19878 526 aaPredicted RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 HOOK2Q96ED9 719 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 IL17RAQ96F46 866 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 PPARGC1AQ9UBK2 798 aaKnown RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 LEMD3Q9Y2U8 911 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 XDHP47989 1333 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 GSTA1P08263 222 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 GSTA2P09210 222 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 TRAIPQ9BWF2 469 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 SMYD2Q9NRG4 433 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 RBM12Q9NTZ6 932 aaKnown RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 E9PMD0 336 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 KRT14P02533 472 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 CDK8P49336 464 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 CALR3Q96L12 384 aaKnown RBP17.1■□□□□ 0.33
COL17A1-202ENST00000369733 ZIM3Q96PE6 472 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 EDEM3Q9BZQ6 932 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 GSG1L2A8MUP6 293 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 ERVV-1B6SEH8 477 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 HAUS5O94927 633 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 TTC4O95801 387 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 RAPH1Q70E73 1250 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 SPICE1Q8N0Z3 855 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 ANO3Q9BYT9 981 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 ANAPC7Q9UJX3 599 aa17.1■□□□□ 0.33
COL17A1-202ENST00000369733 CREB3O43889 395 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 CDR2Q01850 454 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 PDZD4Q76G19 769 aaPredicted RBP17.09■□□□□ 0.33
COL17A1-202ENST00000369733 NSMCE1Q8WV22 266 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 NUDCD1Q96RS6 583 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 HEMGNQ9BXL5 484 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 SMARCAL1Q9NZC9 954 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 JADE1Q6IE81 842 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 KCTD6Q8NC69 237 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 SEC16BQ96JE7 1060 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 ADGRL3Q9HAR2 1447 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 BYSLQ13895 437 aaKnown RBP17.09■□□□□ 0.33
COL17A1-202ENST00000369733 CALN1Q9BXU9 219 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 CNOT8Q9UFF9 292 aaKnown RBP17.09■□□□□ 0.33
COL17A1-202ENST00000369733 NT5C2P49902 561 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 CRLF3Q8IUI8 442 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 HIPK4Q8NE63 616 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 GGT7Q9UJ14 662 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
COL17A1-202ENST00000369733 GOLGA8IPA6NC78 632 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 FAM205CA6NFA0 338 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 GOLGA8JA6NMD2 632 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 KRT3P12035 628 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 FOXO4P98177 505 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 DHX34Q14147 1143 aaKnown RBP17.08■□□□□ 0.33
COL17A1-202ENST00000369733 SCARF1Q14162 830 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 KRT80Q6KB66 452 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 CCDC137Q6PK04 289 aaKnown RBP17.08■□□□□ 0.33
COL17A1-202ENST00000369733 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.33
COL17A1-202ENST00000369733 CPVLQ9H3G5 476 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms