RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 DBR1Q9UK59 544 aaKnown RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 DNAH12Q6ZR08 3092 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 NPHP3-ACAD11A0A0J9YXS1 232 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 SMC2O95347 1197 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 MYL1P05976 194 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 HOXD8P13378 290 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 CTCFP49711 727 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 CPT1AP50416 773 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ASIC1P78348 528 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 SLC9C1Q4G0N8 1177 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 RINT1Q6NUQ1 792 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 C16orf70Q9BSU1 422 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 SPC25Q9HBM1 224 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 HMX1Q9NP08 348 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-204ENST00000369462 NRBP2Q9NSY0 501 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 ERAP1Q9NZ08 941 aa12.19□□□□□ -0.46
BRCC3-204ENST00000369462 SYNRGQ9UMZ2 1314 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 H3BRB1 525 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 MYCP01106 439 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-204ENST00000369462 IDEP14735 1019 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 SLC26A2P50443 739 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-204ENST00000369462 GNASQ5JWF2 1037 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 SASS6Q6UVJ0 657 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 SPATA20Q8TB22 786 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 RNPEPQ9H4A4 650 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 TUT1Q9H6E5 874 aaKnown RBP12.18□□□□□ -0.46
BRCC3-204ENST00000369462 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 WDR81Q562E7 1941 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 MYADML2A6NDP7 307 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 SARSP49591 514 aaKnown RBP12.18□□□□□ -0.46
BRCC3-204ENST00000369462 GJA9P57773 515 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 MTERF2Q49AM1 385 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 C1orf186Q6ZWK4 172 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 CTU1Q7Z7A3 348 aaKnown RBP12.18□□□□□ -0.46
BRCC3-204ENST00000369462 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 CYP26B1Q9NR63 512 aa12.18□□□□□ -0.46
BRCC3-204ENST00000369462 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
BRCC3-204ENST00000369462 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
BRCC3-204ENST00000369462 RPN1P04843 607 aaKnown RBP12.17□□□□□ -0.46
BRCC3-204ENST00000369462 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 PLCB4Q15147 1175 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 NT5DC1Q5TFE4 455 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 FAM167AQ96KS9 214 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 ZNF215Q9UL58 517 aaPredicted RBP12.17□□□□□ -0.46
BRCC3-204ENST00000369462 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 MYL3P08590 195 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 MAEAQ7L5Y9 396 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 NIFKQ9BYG3 293 aaKnown RBP12.17□□□□□ -0.46
BRCC3-204ENST00000369462 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
BRCC3-204ENST00000369462 KLRC4O43908 158 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 GIT2Q14161 759 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 MAN1B1Q9UKM7 699 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 CCDC192P0DO97 292 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 ZNF445P59923 1031 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 TYRO3Q06418 890 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 CNNM4Q6P4Q7 775 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
BRCC3-204ENST00000369462 KCND2Q9NZV8 630 aa12.16□□□□□ -0.46
BRCC3-204ENST00000369462 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 RSPH10B2B2RC85 870 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 HBP1O60381 514 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 MSCO60682 206 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 F2P00734 622 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 RSPH10BP0C881 870 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 MTFR1Q15390 333 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 LRSAM1Q6UWE0 723 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 KAT2BQ92831 832 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 PVALEFA0A1B0GWK0 134 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 DGAT1O75907 488 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 BMP6P22004 513 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 GUCY2CP25092 1073 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 PURAQ00577 322 aaKnown RBP12.15□□□□□ -0.46
BRCC3-204ENST00000369462 TARBP2Q15633 366 aaKnown RBP12.15□□□□□ -0.46
BRCC3-204ENST00000369462 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 LHX8Q68G74 356 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 PPP1R13LQ8WUF5 828 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 TRAPPC12Q8WVT3 735 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 CCDC47Q96A33 483 aaKnown RBP12.15□□□□□ -0.46
BRCC3-204ENST00000369462 FUCA2Q9BTY2 467 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
BRCC3-204ENST00000369462 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 PANK4Q9NVE7 773 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 RMND1Q9NWS8 449 aa12.15□□□□□ -0.46
BRCC3-204ENST00000369462 ZBTB42B2RXF5 422 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 TBCAO75347 108 aaKnown RBP12.15□□□□□ -0.47
BRCC3-204ENST00000369462 INSRRP14616 1297 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 911.3 ms