RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ATP6V0A1Q93050 837 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 FHOD1Q9Y613 1164 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 ATP2A1O14983 1001 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 CYP11B2P19099 503 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 RHBDL3P58872 404 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 GADL1Q6ZQY3 521 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 KCNK18Q7Z418 384 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 COG1Q8WTW3 980 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 DUSP9Q99956 384 aaKnown RBP9.18□□□□□ -0.94
PTPRK-206ENST00000368215 RNF14Q9UBS8 474 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 HIP1RO75146 1068 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 DHX9Q08211 1270 aaKnown RBP9.18□□□□□ -0.94
PTPRK-206ENST00000368215 NNTQ13423 1086 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 UAP1Q16222 522 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-206ENST00000368215 ANKS4BQ8N8V4 417 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 SAAL1Q96ER3 474 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 CABS1Q96KC9 395 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 DNAJC7Q99615 494 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 NSRP1Q9H0G5 558 aaKnown RBP9.18□□□□□ -0.94
PTPRK-206ENST00000368215 PCDHAC2Q9Y5I4 1007 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 KCPQ6ZWJ8 1503 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 RGS16O15492 202 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 UCHL3P15374 230 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PIK3CAP42336 1068 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 HERVK_113P62684 666 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 APBA1Q02410 837 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 KAZNQ674X7 775 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 GJB7Q6PEY0 223 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 B4GALNT4Q76KP1 1039 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 DNAAF5Q86Y56 855 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 GLIS3Q8NEA6 775 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PBKQ96KB5 322 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PNMA5Q96PV4 448 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 SAMD15Q9P1V8 674 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 HERC5Q9UII4 1024 aaKnown RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PSMD14O00487 310 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 ZBTB7AO95365 584 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 ATF7P17544 494 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 NSFP46459 744 aaKnown RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 RNF10Q8N5U6 811 aaKnown RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 ANKRD42Q8N9B4 389 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 CYP2W1Q8TAV3 490 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PLAGL2Q9UPG8 496 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 CAPN6Q9Y6Q1 641 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 POLRMTO00411 1230 aaKnown RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PDXKO00764 312 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 ADAMTS3O15072 1205 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 MSH4O15457 936 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 KLRC1P26715 233 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 LIG3P49916 1009 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 CENPPQ6IPU0 288 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 ANKS1AQ92625 1134 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 MYO1FO00160 1098 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 RPA1P27694 616 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 HOXA7P31268 230 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PSMC6P62333 389 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 IGBP1P78318 339 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PTK2Q05397 1052 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 SLC18A3Q16572 532 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 C10orf76Q5T2E6 689 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 XXYLT1Q8NBI6 393 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-206ENST00000368215 PLCD4Q9BRC7 762 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 BLOC1S4Q9NUP1 217 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 TRPC6Q9Y210 931 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 CSADQ9Y600 493 aa9.17□□□□□ -0.94
PTPRK-206ENST00000368215 NEBLO76041 1014 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 GAS8O95995 478 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 TMOD1P28289 359 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ADCY8P40145 1251 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 EMBQ6PCB8 327 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 FRMD5Q7Z6J6 570 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 PRPF38AQ8NAV1 312 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 TNFRSF25Q93038 417 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 RUSC1Q9BVN2 902 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 INTS2Q9H0H0 1204 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF70Q9UC06 446 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 PCDHB4Q9Y5E5 795 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ZHX2Q9Y6X8 837 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 EMSYQ7Z589 1322 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 BUB1BO60566 1050 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ABL1P00519 1130 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 P4HBP07237 508 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 SLCO1A2P46721 670 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 QARSP47897 775 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 PDCLQ13371 301 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 RASA3Q14644 834 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 TRIP13Q15645 432 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 PRAMEF18Q5VWM3 479 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 INTS8Q75QN2 995 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 CERS5Q8N5B7 392 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 SLC7A3Q8WY07 619 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms