RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RNF186Q9NXI6 227 aa17.31■□□□□ 0.36
CTSA-202ENST00000354880 RWDD2AQ9UIY3 292 aa17.31■□□□□ 0.36
CTSA-202ENST00000354880 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
CTSA-202ENST00000354880 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
CTSA-202ENST00000354880 GAP43P17677 238 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 ATP4AP20648 1035 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 KIF22Q14807 665 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 CCDC144BQ3MJ40 725 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
CTSA-202ENST00000354880 IQSEC1Q6DN90 963 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
CTSA-202ENST00000354880 DHTKD1Q96HY7 919 aaPredicted RBP17.3■□□□□ 0.36
CTSA-202ENST00000354880 CEP170P1Q96L14 293 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 SEPT9Q9UHD8 586 aaPredicted RBP17.3■□□□□ 0.36
CTSA-202ENST00000354880 NFE2L3Q9Y4A8 694 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 ZSWIM8A7E2V4 1837 aa17.3■□□□□ 0.36
CTSA-202ENST00000354880 NKRFO15226 690 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTSA-202ENST00000354880 FAM13AO94988 1023 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 OATP04181 439 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 XRCC5P13010 732 aaKnown RBP17.29■□□□□ 0.36
CTSA-202ENST00000354880 CYP2C19P33261 490 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 SPATA1Q5VX52 437 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 SFR1Q86XK3 245 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 GUF1Q8N442 669 aaKnown RBP17.29■□□□□ 0.36
CTSA-202ENST00000354880 TIPINQ9BVW5 301 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 PARVGQ9HBI0 331 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 POLD4Q9HCU8 107 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 TBC1D7Q9P0N9 293 aa17.29■□□□□ 0.36
CTSA-202ENST00000354880 SFI1A8K8P3 1242 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 AP5Z1O43299 807 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 HIP1RO75146 1068 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 LGR5O75473 907 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 IGHA2P01877 340 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 SMPD1P17405 629 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 PTGS1P23219 599 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 ZNF131P52739 623 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 PRAMEF19Q5SWL8 479 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 PPTC7Q8NI37 304 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 GLG1Q92896 1179 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 EMSYQ7Z589 1322 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 MYH11P35749 1972 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 ARID2Q68CP9 1835 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 ZNF865P0CJ78 1059 aaPredicted RBP17.28■□□□□ 0.36
CTSA-202ENST00000354880 PLPPR4Q7Z2D5 763 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 MYOCDQ8IZQ8 938 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 MYCT1Q8N699 235 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 GLIS3Q8NEA6 775 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 CYP26B1Q9NR63 512 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 SEL1LQ9UBV2 794 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 GABRQQ9UN88 632 aa17.28■□□□□ 0.36
CTSA-202ENST00000354880 CCNE1P24864 410 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 FLT3LGP49771 235 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 MAPK7Q13164 816 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 LRRC41Q15345 812 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 TPD52L1Q16890 204 aaPredicted RBP17.27■□□□□ 0.36
CTSA-202ENST00000354880 SARM1Q6SZW1 724 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 MAEAQ7L5Y9 396 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 DAW1Q8N136 415 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 P2RX5Q93086 422 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 FAM167AQ96KS9 214 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 FGFBP2Q9BYJ0 223 aa17.27■□□□□ 0.36
CTSA-202ENST00000354880 MRPL44Q9H9J2 332 aaKnown RBP17.27■□□□□ 0.36
CTSA-202ENST00000354880 BICDL2A1A5D9 508 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 TRIM49BA6NDI0 452 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 DGAT1O75907 488 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 KIF20AO95235 890 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 ADCY5O95622 1261 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 SLC26A2P50443 739 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
CTSA-202ENST00000354880 PRKCZQ05513 592 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 MTERF2Q49AM1 385 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 TRIM50Q86XT4 487 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 DRC1Q96MC2 740 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 NIFKQ9BYG3 293 aaKnown RBP17.26■□□□□ 0.35
CTSA-202ENST00000354880 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 THSD7BQ9C0I4 1608 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 ADCY6O43306 1168 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 ODR4Q5SWX8 454 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 CENPPQ6IPU0 288 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 OR6J1Q8NGC5 347 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 TRIM5Q9C035 493 aa17.26■□□□□ 0.35
CTSA-202ENST00000354880 SAMSN1Q9NSI8 373 aaKnown RBP17.26■□□□□ 0.35
CTSA-202ENST00000354880 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
CTSA-202ENST00000354880 ATP1A3P13637 1013 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 ZNF18P17022 549 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 CASP5P51878 434 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 CAP1Q01518 475 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 FAM102BQ5T8I3 360 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 TTI2Q6NXR4 508 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 EPM2AIP1Q7L775 607 aaPredicted RBP17.25■□□□□ 0.35
CTSA-202ENST00000354880 FAM178BQ8IXR5 827 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms