RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 SDCCAG8Q86SQ7 713 aaPredicted RBP20.84■□□□□ 0.93
SH2B3-201ENST00000341259 XXYLT1Q8NBI6 393 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 MCPH1Q8NEM0 835 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 FAN1Q9Y2M0 1017 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 Q3C1V9 767 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 NSUN6Q8TEA1 469 aaKnown RBP20.84■□□□□ 0.93
SH2B3-201ENST00000341259 MAD1L1Q9Y6D9 718 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 USP27XA6NNY8 438 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 LDHAP00338 332 aaKnown RBP20.83■□□□□ 0.93
SH2B3-201ENST00000341259 GFPT1Q06210 699 aaPredicted RBP20.83■□□□□ 0.93
SH2B3-201ENST00000341259 RHOT2Q8IXI1 618 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 ABCB6Q9NP58 842 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 POC1B-GALNT4F8VUJ3 575 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 SLC16A4O15374 487 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 P4HBP07237 508 aaKnown RBP20.83■□□□□ 0.93
SH2B3-201ENST00000341259 FBXO38Q6PIJ6 1188 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 TCP11Q8WWU5 503 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 EIF2AK1Q9BQI3 630 aaKnown RBP20.83■□□□□ 0.93
SH2B3-201ENST00000341259 FBXO40Q9UH90 709 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 ANAPC5Q9UJX4 755 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 KCNB1Q14721 858 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 IFT122Q9HBG6 1241 aa20.83■□□□□ 0.93
SH2B3-201ENST00000341259 DHX9Q08211 1270 aaKnown RBP20.83■□□□□ 0.92
SH2B3-201ENST00000341259 SLC10A4Q96EP9 437 aa20.83■□□□□ 0.92
SH2B3-201ENST00000341259 KAZALD1Q96I82 304 aa20.83■□□□□ 0.92
SH2B3-201ENST00000341259 MYO1EQ12965 1108 aa20.83■□□□□ 0.92
SH2B3-201ENST00000341259 SPATS2Q86XZ4 545 aaKnown RBP20.83■□□□□ 0.92
SH2B3-201ENST00000341259 BEGAINQ9BUH8 593 aa20.83■□□□□ 0.92
SH2B3-201ENST00000341259 DYNLT1P63172 113 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 ZNF543Q08ER8 600 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 NAALADL2Q58DX5 795 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 PRPF38AQ8NAV1 312 aaKnown RBP20.82■□□□□ 0.92
SH2B3-201ENST00000341259 MEGF6O75095 1541 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 GCLMP48507 274 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 DR1Q01658 176 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 ITKQ08881 620 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 STRIP1Q5VSL9 837 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 C16orf86Q6ZW13 317 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 LXNQ9BS40 222 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 QARSP47897 775 aaKnown RBP20.82■□□□□ 0.92
SH2B3-201ENST00000341259 SPP2Q13103 211 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 ZBTB7AO95365 584 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 SFNP31947 248 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 FAM149B1Q96BN6 582 aa20.82■□□□□ 0.92
SH2B3-201ENST00000341259 RIMS1Q86UR5 1692 aaKnown RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 TTC26A0AVF1 554 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 SRGAP2O75044 1071 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 GIMAP8Q8ND71 665 aaPredicted RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 SPATA31A6Q5VVP1 1343 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 ARHGEF28Q8N1W1 1705 aaKnown RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 IPO5O00410 1097 aaKnown RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 PPP4R1Q8TF05 950 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 PNMA3Q9UL41 463 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 PDIA5Q14554 519 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 OR6B2Q6IFH4 312 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 MCF2LO15068 1137 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 TPD52P55327 224 aaPredicted RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 APOBEC3FQ8IUX4 373 aaKnown RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 DPF2Q92785 391 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 HEXIM2Q96MH2 286 aaKnown RBP20.81■□□□□ 0.92
SH2B3-201ENST00000341259 SEL1LQ9UBV2 794 aa20.81■□□□□ 0.92
SH2B3-201ENST00000341259 CASP8Q14790 479 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 C7orf31Q8N865 590 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 KCTD6Q8NC69 237 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 WHAMMQ8TF30 809 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 FAM167AQ96KS9 214 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 ADGRG1Q9Y653 693 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 CCSER1Q9C0I3 900 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 HPS5Q9UPZ3 1129 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 RASA1P20936 1047 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 RASSF2P50749 326 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 DPYDQ12882 1025 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 CDC42EP5Q6NZY7 148 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 INTS5Q6P9B9 1019 aaKnown RBP20.8■□□□□ 0.92
SH2B3-201ENST00000341259 RPUSD2Q8IZ73 545 aaKnown RBP20.8■□□□□ 0.92
SH2B3-201ENST00000341259 INTS9Q9NV88 658 aaKnown RBP20.8■□□□□ 0.92
SH2B3-201ENST00000341259 RWDD2BP57060 319 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 ANKRD40Q6AI12 368 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 CAPN7Q9Y6W3 813 aa20.8■□□□□ 0.92
SH2B3-201ENST00000341259 A0A1W2PQC6 194 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 FGGP02679 453 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 TRIP13Q15645 432 aaPredicted RBP20.79■□□□□ 0.92
SH2B3-201ENST00000341259 KIAA1586Q9HCI6 787 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 PDS5AQ29RF7 1337 aaKnown RBP20.79■□□□□ 0.92
SH2B3-201ENST00000341259 LRRD1A4D1F6 860 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 IQCB1Q15051 598 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 LDHDQ86WU2 507 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 SLC38A10Q9HBR0 1119 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 ZNF302Q9NR11 478 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 PCK1P35558 622 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 EN1Q05925 392 aaPredicted RBP20.79■□□□□ 0.92
SH2B3-201ENST00000341259 CLEC10AQ8IUN9 316 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 THNSL1Q8IYQ7 743 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 GABBR1Q9UBS5 961 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 ANO9A1A5B4 782 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 DENND3A2RUS2 1198 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 STXBP3O00186 592 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 INHBAP08476 426 aa20.79■□□□□ 0.92
SH2B3-201ENST00000341259 METTL23Q86XA0 190 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms