RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 C1orf131Q8NDD1 294 aaKnown RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 NLGN2Q8NFZ4 835 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 IQCDQ96DY2 449 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 NOC4LQ9BVI4 516 aaKnown RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 KIAA1024Q9UPX6 916 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CYP3A7-CYP3A51PA0A087WV96 503 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 PVALEFA0A1B0GWK0 134 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 NCK2O43639 380 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CYP3A7P24462 503 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 MTIF2P46199 727 aaKnown RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 SMTNP53814 917 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 ZNF280AP59817 542 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 ACTN3Q08043 901 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 FAM114A1Q8IWE2 563 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 MYCBPAPQ8TBZ2 947 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CRYGNQ8WXF5 182 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 ZKSCAN4Q969J2 545 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CCT8L2Q96SF2 557 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 NFU1Q9UMS0 254 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 E9PMD0 336 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 NKRFO15226 690 aaKnown RBP eCLIP20.55■□□□□ 0.88
PSPC1-201ENST00000338910 EIF4A3P38919 411 aaKnown RBP20.55■□□□□ 0.88
PSPC1-201ENST00000338910 GMPSP49915 693 aaPredicted RBP20.55■□□□□ 0.88
PSPC1-201ENST00000338910 PLCB4Q15147 1175 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 MICALL2Q8IY33 904 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 CCDC155Q8N6L0 562 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 CD248Q9HCU0 757 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 SALL4Q9UJQ4 1053 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 SYNPO2Q9UMS6 1093 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 RASSF9O75901 435 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 PAK2Q13177 524 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 NLRP14Q86W24 1093 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 GLIS2Q9BZE0 524 aaPredicted RBP20.55■□□□□ 0.88
PSPC1-201ENST00000338910 GOPCQ9HD26 462 aa20.55■□□□□ 0.88
PSPC1-201ENST00000338910 ASTN2O75129 1339 aaPredicted RBP20.55■□□□□ 0.88
PSPC1-201ENST00000338910 SRRM3A6NNA2 597 aaPredicted RBP20.54■□□□□ 0.88
PSPC1-201ENST00000338910 FAM86B1E9PN63 330 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 PJA2O43164 708 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 FAM86B2P0C5J1 330 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 MDH1P40925 334 aaKnown RBP20.54■□□□□ 0.88
PSPC1-201ENST00000338910 SEC24CP53992 1094 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 TBC1D10BQ4KMP7 808 aaPredicted RBP20.54■□□□□ 0.88
PSPC1-201ENST00000338910 CCDC174Q6PII3 467 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 POTEB3A0JP26 581 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 POTECB2RU33 542 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 KIF1CO43896 1103 aaKnown RBP20.54■□□□□ 0.88
PSPC1-201ENST00000338910 FAM107AO95990 144 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 RPS12P25398 132 aaKnown RBP20.54■□□□□ 0.88
PSPC1-201ENST00000338910 LRRC41Q15345 812 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 POTEBQ6S5H4 581 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 CCDC13Q8IYE1 715 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 GLIS3Q8NEA6 775 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 CYP2W1Q8TAV3 490 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 TBC1D5Q92609 795 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 ATP6V1G3Q96LB4 118 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 MBOAT7Q96N66 472 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 KLC4Q9NSK0 619 aa20.54■□□□□ 0.88
PSPC1-201ENST00000338910 ZSCAN5CA6NGD5 496 aaPredicted RBP20.53■□□□□ 0.88
PSPC1-201ENST00000338910 EPHB6O15197 1021 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 FOSP01100 380 aaPredicted RBP20.53■□□□□ 0.88
PSPC1-201ENST00000338910 CCDC40Q4G0X9 1142 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 KLHDC7AQ5VTJ3 777 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 C6orf89Q6UWU4 347 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 SLFN12Q8IYM2 578 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 MS4A14Q96JA4 679 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 LRRC27Q9C0I9 530 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 NT5C3AQ9H0P0 336 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 EPB41L5Q9HCM4 733 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 CNOT7Q9UIV1 285 aaKnown RBP20.53■□□□□ 0.88
PSPC1-201ENST00000338910 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 FZD9O00144 591 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 AKR1B10O60218 316 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 HEXIM1O94992 359 aaKnown RBP20.53■□□□□ 0.88
PSPC1-201ENST00000338910 PPP1R2P41236 205 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 MAP3K10Q02779 954 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 CFAP221Q4G0U5 840 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 RNF187Q5TA31 235 aaPredicted RBP20.53■□□□□ 0.88
PSPC1-201ENST00000338910 CENPPQ6IPU0 288 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 ETNPPLQ8TBG4 499 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 TEPSINQ96N21 525 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 RNF14Q9UBS8 474 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 SIK3Q9Y2K2 1263 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 LTBP3Q9NS15 1303 aa20.53■□□□□ 0.88
PSPC1-201ENST00000338910 ESYT3A0FGR9 886 aa20.52■□□□□ 0.88
PSPC1-201ENST00000338910 CFBP00751 764 aa20.52■□□□□ 0.88
PSPC1-201ENST00000338910 SREBF1P36956 1147 aa20.52■□□□□ 0.88
PSPC1-201ENST00000338910 GUCY2DQ02846 1103 aa20.52■□□□□ 0.88
PSPC1-201ENST00000338910 ITGB3BPQ13352 177 aaPredicted RBP20.52■□□□□ 0.88
PSPC1-201ENST00000338910 DNAJC19Q96DA6 116 aa20.52■□□□□ 0.88
PSPC1-201ENST00000338910 SUFUQ9UMX1 484 aa20.52■□□□□ 0.88
PSPC1-201ENST00000338910 HMGB1P1B2RPK0 211 aaPredicted RBP20.52■□□□□ 0.87
PSPC1-201ENST00000338910 MED24O75448 989 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 MAGEA1P43355 309 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 IFT88Q13099 833 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 DRP2Q13474 957 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 PREPLQ4J6C6 727 aaPredicted RBP20.52■□□□□ 0.87
PSPC1-201ENST00000338910 HYIQ5T013 277 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 MOXD1Q6UVY6 613 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 LENG9Q96B70 501 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms