RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 STK3Q13188 491 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 ANKRD1Q15327 319 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 NPY5RQ15761 445 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 PTPROQ16827 1216 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 RTN4RL1Q86UN2 441 aaPredicted RBP20.07■□□□□ 0.8
HDDC3-201ENST00000330334 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 FIBCD1Q8N539 461 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 RDM1Q8NG50 284 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 MRPL38Q96DV4 380 aaKnown RBP20.07■□□□□ 0.8
HDDC3-201ENST00000330334 MBOAT7Q96N66 472 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 UIMC1Q96RL1 719 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 DISC1Q9NRI5 854 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 RWDD3Q9Y3V2 267 aa20.07■□□□□ 0.8
HDDC3-201ENST00000330334 BDP1A6H8Y1 2624 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 TNFRSF10AO00220 468 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 MAGEB2O15479 319 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 PFKFB2O60825 505 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 DGKIO75912 1065 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 C22orf31O95567 290 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 TTC3P53804 2025 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 TFF2Q03403 129 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 SCRN1Q12765 414 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 PAK2Q13177 524 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 ODR4Q5SWX8 454 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 ADAMTS19Q8TE59 1207 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 LINC01599Q8WXQ3 324 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 CLP1Q92989 425 aaKnown RBP20.06■□□□□ 0.8
HDDC3-201ENST00000330334 SLKQ9H2G2 1235 aaPredicted RBP20.06■□□□□ 0.8
HDDC3-201ENST00000330334 GABBR1Q9UBS5 961 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 TPCN1Q9ULQ1 816 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 SAMM50Q9Y512 469 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 SIP14410 1827 aa20.06■□□□□ 0.8
HDDC3-201ENST00000330334 STK36Q9NRP7 1315 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 GAS7O60861 476 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 PSMD10O75832 226 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 LINC00271P0C7V0 271 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 JAK3P52333 1124 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 LRCH2Q5VUJ6 765 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 KRT25Q7Z3Z0 450 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 NPAS4Q8IUM7 802 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 NRBP2Q9NSY0 501 aa20.05■□□□□ 0.8
HDDC3-201ENST00000330334 ADGRA3Q8IWK6 1321 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 STAG3L1P0CL83 205 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 XBP1P17861 261 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 BMPR1AP36894 532 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 CRYBB1P53674 252 aaPredicted RBP20.04■□□□□ 0.8
HDDC3-201ENST00000330334 GPM6BQ13491 265 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 NONOQ15233 471 aaKnown RBP eCLIP20.04■□□□□ 0.8
HDDC3-201ENST00000330334 B3GNT9Q6UX72 402 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 AIFM3Q96NN9 605 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 UHRF1Q96T88 793 aaPredicted RBP20.04■□□□□ 0.8
HDDC3-201ENST00000330334 PHF20Q9BVI0 1012 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 TEKT3Q9BXF9 490 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 TMX1Q9H3N1 280 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 ERVK-5Q9HDB9 667 aa20.04■□□□□ 0.8
HDDC3-201ENST00000330334 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
HDDC3-201ENST00000330334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-201ENST00000330334 GPR182O15218 404 aa20.03■□□□□ 0.8
HDDC3-201ENST00000330334 ZNF862O60290 1169 aa20.03■□□□□ 0.8
HDDC3-201ENST00000330334 GPR32O75388 356 aa20.03■□□□□ 0.8
HDDC3-201ENST00000330334 PLVAPQ9BX97 442 aa20.03■□□□□ 0.8
HDDC3-201ENST00000330334 CDHR5Q9HBB8 845 aa20.03■□□□□ 0.8
HDDC3-201ENST00000330334 COL4A4P53420 1690 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-201ENST00000330334 RPS6KA5O75582 802 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 OATP04181 439 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 TMOD1P28289 359 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 BTG3Q14201 252 aaPredicted RBP20.02■□□□□ 0.8
HDDC3-201ENST00000330334 TIGD5Q53EQ6 642 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 CMTR2Q8IYT2 770 aaKnown RBP20.02■□□□□ 0.8
HDDC3-201ENST00000330334 METTL13Q8N6R0 699 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 LINC01465Q8N7H1 131 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 C11orf84Q9BUA3 381 aaPredicted RBP20.02■□□□□ 0.8
HDDC3-201ENST00000330334 LMAN2LQ9H0V9 348 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 UNC45AQ9H3U1 944 aa20.02■□□□□ 0.8
HDDC3-201ENST00000330334 NOC2LQ9Y3T9 749 aaKnown RBP20.02■□□□□ 0.8
HDDC3-201ENST00000330334 TDP2O95551 362 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 SARSP49591 514 aaKnown RBP20.01■□□□□ 0.79
HDDC3-201ENST00000330334 KCNQ1P51787 676 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 AK2P54819 239 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 PRKCEQ02156 737 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 NFX1Q12986 1120 aaKnown RBP20.01■□□□□ 0.79
HDDC3-201ENST00000330334 NAALADL2Q58DX5 795 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 PPP4R3AQ6IN85 833 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 TMEM40Q8WWA1 233 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 WASF1Q92558 559 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 NIFKQ9BYG3 293 aaKnown RBP20.01■□□□□ 0.79
HDDC3-201ENST00000330334 RGS18Q9NS28 235 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 C1orf112Q9NSG2 853 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 ST3GAL5Q9UNP4 418 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 KCNJ14Q9UNX9 436 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 GINS2Q9Y248 185 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 BRWD1Q9NSI6 2320 aa20.01■□□□□ 0.79
HDDC3-201ENST00000330334 CTDNEP1O95476 244 aa20■□□□□ 0.79
HDDC3-201ENST00000330334 GCFC2P16383 781 aaKnown RBP20■□□□□ 0.79
HDDC3-201ENST00000330334 CTNNB1P35222 781 aa20■□□□□ 0.79
HDDC3-201ENST00000330334 TARBP2Q15633 366 aaKnown RBP20■□□□□ 0.79
HDDC3-201ENST00000330334 KIZQ2M2Z5 673 aa20■□□□□ 0.79
HDDC3-201ENST00000330334 TMEM266Q2M3C6 531 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms