RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 H0YGN5 161 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 TRIM49P0CI25 452 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 TRIM49CP0CI26 452 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 ACTN3Q08043 901 aaPredicted RBP18.09■□□□□ 0.49
SSH3-201ENST00000308127 ARHGAP44Q17R89 818 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 TAS2R14Q9NYV8 317 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 TMOD4Q9NZQ9 345 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 PPP1R9AQ9ULJ8 1098 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 NFS1Q9Y697 457 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 SHMT1P34896 483 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 GALCP54803 685 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 IRX3P78415 501 aaPredicted RBP18.09■□□□□ 0.49
SSH3-201ENST00000308127 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
SSH3-201ENST00000308127 NBPF9Q3BBW0 867 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 CERS5Q8N5B7 392 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 C8orf37Q96NL8 207 aa18.09■□□□□ 0.49
SSH3-201ENST00000308127 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
SSH3-201ENST00000308127 MAST2Q6P0Q8 1798 aa18.08■□□□□ 0.49
SSH3-201ENST00000308127 HMGB1P1B2RPK0 211 aaPredicted RBP18.08■□□□□ 0.48
SSH3-201ENST00000308127 BUB1BO60566 1050 aaPredicted RBP18.08■□□□□ 0.48
SSH3-201ENST00000308127 NR3C1P04150 777 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 H2AFZP0C0S5 128 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.48
SSH3-201ENST00000308127 TBC1D10BQ4KMP7 808 aaPredicted RBP18.08■□□□□ 0.48
SSH3-201ENST00000308127 H2AFVQ71UI9 128 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 MREGQ8N565 214 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 LNX1Q8TBB1 728 aaPredicted RBP18.08■□□□□ 0.48
SSH3-201ENST00000308127 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.08■□□□□ 0.48
SSH3-201ENST00000308127 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 FAM86B1E9PN63 330 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 GNA14O95837 355 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 SNHG28P0DPA3 235 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 CCDC13Q8IYE1 715 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 TBC1D16Q8TBP0 767 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 SIX2Q9NPC8 291 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 PLCB1Q9NQ66 1216 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 SBF2Q86WG5 1849 aa18.08■□□□□ 0.48
SSH3-201ENST00000308127 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 KDM3AQ9Y4C1 1321 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 SHBGP04278 402 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 PLCG2P16885 1265 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 GABPAQ06546 454 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 IFFO1Q0D2I5 559 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 EPHA7Q15375 998 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 ARHGEF26Q96DR7 871 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 DDX20Q9UHI6 824 aaKnown RBP18.07■□□□□ 0.48
SSH3-201ENST00000308127 SPATA31C1P0DKV0 1188 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 CYP2J2P51589 502 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 ARHGAP4P98171 946 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 MAEAQ7L5Y9 396 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 SLC35C1Q96A29 364 aa18.07■□□□□ 0.48
SSH3-201ENST00000308127 ASTN1O14525 1302 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 CDK5RAP2Q96SN8 1893 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 EVI5O60447 810 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 FLOT1O75955 427 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 GDF11O95390 407 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 FAM107AO95990 144 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
SSH3-201ENST00000308127 SPICE1Q8N0Z3 855 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 CNPY4Q8N129 248 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 PRPF38AQ8NAV1 312 aaKnown RBP18.06■□□□□ 0.48
SSH3-201ENST00000308127 ELMO3Q96BJ8 720 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 KCNQ5Q9NR82 932 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 PNMA2Q9UL42 364 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 DNM3Q9UQ16 869 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 EML1O00423 815 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 DCAF12L1Q5VU92 463 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 CD302Q8IX05 232 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 RAPGEF5Q92565 580 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 KCNMB3Q9NPA1 279 aa18.06■□□□□ 0.48
SSH3-201ENST00000308127 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
SSH3-201ENST00000308127 GOLGA6L7A0A1B0GV03 622 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SLCO1A2P46721 670 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 NT5DC3Q86UY8 548 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SLC35G2Q8TBE7 412 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SLC12A6Q9UHW9 1150 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SNX24Q9Y343 169 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SPDYE3A6NKU9 549 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 DNM1LO00429 736 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 MEIS2O14770 477 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 OPLAHO14841 1288 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 EEF2P13639 858 aaKnown RBP18.05■□□□□ 0.48
SSH3-201ENST00000308127 MARSP56192 900 aaKnown RBP18.05■□□□□ 0.48
SSH3-201ENST00000308127 ZNF746Q6NUN9 644 aaPredicted RBP18.05■□□□□ 0.48
SSH3-201ENST00000308127 TMC3Q7Z5M5 1100 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 CPNE8Q86YQ8 564 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SUGP1Q8IWZ8 645 aaKnown RBP18.05■□□□□ 0.48
SSH3-201ENST00000308127 CABS1Q96KC9 395 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 CCDC114Q96M63 670 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 GMNCA6NCL1 334 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 CAND2O75155 1236 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
SSH3-201ENST00000308127 IL1R1P14778 569 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 PLTPP55058 493 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SPIRE1Q08AE8 756 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms