RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 AFG3L2Q9Y4W6 797 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 BUB1O43683 1085 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 CHGBP05060 677 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 ERCC3P19447 782 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 ADCY8P40145 1251 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 STAT2P52630 851 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 GABPAQ06546 454 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 STRN3Q13033 797 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 ASPRV1Q53RT3 343 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 FBXO38Q6PIJ6 1188 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 CTAGE3PQ8IX95 158 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 KCNG1Q9UIX4 513 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 BZW2Q9Y6E2 419 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 TMEM232C9JQI7 657 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 CHMP2AO43633 222 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 RPN1P04843 607 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 HNRNPH2P55795 449 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 ARHGAP44Q17R89 818 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 DPCR1Q3MIW9 517 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PALM2Q8IXS6 379 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 GPRC5AQ8NFJ5 357 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 KRT12Q99456 494 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 TNKSO95271 1327 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 F5H6K3 240 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 ABCB4P21439 1286 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PDIA3P30101 505 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 KLRC3Q07444 240 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 ALS2CLQ60I27 953 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 LRRC8CQ8TDW0 803 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 BTBD18B2RXH4 712 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 LONP1P36776 959 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 IL9RQ01113 521 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 KCTD2Q14681 263 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 C11orf57Q6ZUT1 292 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 GSDMBQ8TAX9 411 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 CNOT10Q9H9A5 744 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 SMIM24O75264 130 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 BAG2O95816 211 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 MAGEA9P43362 315 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 TM4SF4P48230 202 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 CLIC4Q9Y696 253 aa12.84□□□□□ -0.35
SYNGAP1-201ENST00000293748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 BTBD19C9JJ37 291 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 HEXIM1O94992 359 aaKnown RBP12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 IFNB1P01574 187 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 HARSP12081 509 aaKnown RBP12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 COG7P83436 770 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 ARHGAP4P98171 946 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 NCAPG2Q86XI2 1143 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 TCP11Q8WWU5 503 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 CUEDC2Q9H467 287 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.35
SYNGAP1-201ENST00000293748 ROBO3Q96MS0 1386 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 PSME4Q14997 1843 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 EHHADHQ08426 723 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 CASP8Q14790 479 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 MCTP2Q6DN12 878 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 KLHL29Q96CT2 875 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 RNF186Q9NXI6 227 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 MAN1A1P33908 653 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 MMS22LQ6ZRQ5 1243 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 TMEM87AQ8NBN3 555 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 RAET1EQ8TD07 263 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 BRI3BPQ8WY22 251 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 CLIC6Q96NY7 704 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 TUBGCP2Q9BSJ2 902 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 TPX2Q9ULW0 747 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 A0A1B0GUL6 1792 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 MYO1CO00159 1063 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 PRMT2P55345 433 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 POLR2FP61218 127 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 SCRN1Q12765 414 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 CASC4Q6P4E1 433 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 MIER3Q7Z3K6 550 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 CPXCR1Q8N123 301 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 SPZ1Q9BXG8 430 aa12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 FAF1Q9UNN5 650 aaPredicted RBP12.83□□□□□ -0.36
SYNGAP1-201ENST00000293748 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 VSTM4Q8IW00 320 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms