RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 DAAM1Q9Y4D1 1078 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 EIF3HO15372 352 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 KLHDC7AQ5VTJ3 777 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 BANK1Q8NDB2 785 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 MMTAG2Q9BU76 263 aaKnown RBP17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 COA1Q9GZY4 146 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 MED24O75448 989 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 GYS1P13807 737 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 GCLMP48507 274 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 FAM133BQ5BKY9 247 aaKnown RBP17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 C16orf86Q6ZW13 317 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 PACS2Q86VP3 889 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 MDM1Q8TC05 714 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 MYH8P13535 1937 aa17.59■□□□□ 0.41
PDZRN3-201ENST00000263666 ITGA4P13612 1032 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 CTNNA2P26232 953 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 PSMD2Q13200 908 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 ICE2Q659A1 982 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 VIPAS39Q9H9C1 493 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 KCNA1Q09470 495 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 KNOP1Q1ED39 458 aaKnown RBP17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 SLC35G1Q2M3R5 365 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 ANKS4BQ8N8V4 417 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 CSRNP1Q96S65 589 aa17.58■□□□□ 0.41
PDZRN3-201ENST00000263666 MYH10P35580 1976 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 NF2P35240 595 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 MYL7Q01449 175 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 DRAP1Q14919 205 aaPredicted RBP17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 SYCE1Q8N0S2 351 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 ACSL3O95573 720 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 GLG1Q92896 1179 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 DYDC2Q96IM9 177 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 FMO2Q99518 471 aa17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 RTFDC1Q9BY42 306 aaPredicted RBP17.58■□□□□ 0.4
PDZRN3-201ENST00000263666 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 ZBTB39O15060 712 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 ATMINO43313 823 aaPredicted RBP17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 LRRC14Q15048 493 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 ECM1Q16610 540 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 NBPF9Q3BBW0 867 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 PHF20L1A8MW92 1017 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 F5H6K3 240 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 LSP1P33241 339 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 KLRC3Q07444 240 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 TBC1D16Q8TBP0 767 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 TCHPQ9BT92 498 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 TAF1DQ9H5J8 278 aaPredicted RBP17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 MTUS1Q9ULD2 1270 aa17.57■□□□□ 0.4
PDZRN3-201ENST00000263666 ALAS1P13196 640 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 PSMC2P35998 433 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 CASP5P51878 434 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 GALCP54803 685 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 MEA1Q16626 185 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 FAM102BQ5T8I3 360 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 GKAP1Q5VSY0 366 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 NLRP14Q86W24 1093 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 MMGT1Q8N4V1 131 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 ANKS1AQ92625 1134 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 OSGEPQ9NPF4 335 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 NAA25Q14CX7 972 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 HP1BP3Q5SSJ5 553 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 COL23A1Q86Y22 540 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 EIF4E1BA6NMX2 242 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 GCFC2P16383 781 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 CYP11B2P19099 503 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 CORO7P57737 925 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 AOC3Q16853 763 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 RNF10Q8N5U6 811 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 SCFD1Q8WVM8 642 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 ATP6V1G3Q96LB4 118 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 CCT8L2Q96SF2 557 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 FAM53CQ9NYF3 392 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 SIK3Q9Y2K2 1263 aa17.56■□□□□ 0.4
PDZRN3-201ENST00000263666 CATSPER3Q86XQ3 398 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 METTL13Q8N6R0 699 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 GDAP1Q8TB36 358 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 FAM118BQ9BPY3 351 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 RAB17Q9H0T7 212 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 BCAS3Q9H6U6 928 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 METTL14Q9HCE5 456 aaKnown RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 PPP1R37O75864 691 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 DR1Q01658 176 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 PROM2Q8N271 834 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 WHAMMQ8TF30 809 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 ABCC6O95255 1503 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 BMP3P12645 472 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 MIER3Q7Z3K6 550 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 ZNF571Q7Z3V5 609 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms