RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 KCNJ2P63252 427 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 DAAM2Q86T65 1068 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 DYNLL2Q96FJ2 89 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 FAM210AQ96ND0 272 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 PRMT1Q99873 361 aaKnown RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 NUDT12Q9BQG2 462 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 CPSF2Q9P2I0 782 aaKnown RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 TLDC2A0PJX2 215 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 NUDT17P0C025 328 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 CCND1P24385 295 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 MIS18BP1Q6P0N0 1132 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 IRF2BP2Q7Z5L9 587 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 REXO1Q8N1G1 1221 aaKnown RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 RAB17Q9H0T7 212 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 CCDC169A6NNP5 214 aa16.27■□□□□ 0.19
XRCC1-201ENST00000262887 FLOT1O75955 427 aa16.27■□□□□ 0.19
XRCC1-201ENST00000262887 ACTN1P12814 892 aa16.27■□□□□ 0.19
XRCC1-201ENST00000262887 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.19
XRCC1-201ENST00000262887 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.19
XRCC1-201ENST00000262887 SUCLA2Q9P2R7 463 aaPredicted RBP16.27■□□□□ 0.19
XRCC1-201ENST00000262887 BZW2Q9Y6E2 419 aaKnown RBP16.27■□□□□ 0.19
XRCC1-201ENST00000262887 SMIM23A6NLE4 172 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 UBOX5O94941 541 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 MARSP56192 900 aaKnown RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 NCALDP61601 193 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 KCNH2Q12809 1159 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 ATP8B4Q8TF62 1192 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 CCDC134Q9H6E4 229 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 HOMER3Q9NSC5 361 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 SLC5A4Q9NY91 659 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 RGS16O15492 202 aaPredicted RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 SLC37A4O43826 429 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 FGGP02679 453 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 RARAP10276 462 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 PRDX5P30044 214 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 CDC25CP30307 473 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 PMS2P54278 862 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 EVA1CP58658 441 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 POU5F1Q01860 360 aaKnown RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 TRAF1Q13077 416 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 RBBP5Q15291 538 aaKnown RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 DENND2CQ68D51 928 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 HOMEZQ8IX15 550 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 SYCE1Q8N0S2 351 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 FGFBP2Q9BYJ0 223 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 EPB41L4BQ9H329 900 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 PABPC3Q9H361 631 aaKnown RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 TMEM260Q9NX78 707 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 STXBP5LQ9Y2K9 1186 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
XRCC1-201ENST00000262887 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
XRCC1-201ENST00000262887 TTC36A6NLP5 189 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 AP1G2O75843 785 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 CADPS2Q86UW7 1296 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 DNAJC19Q96DA6 116 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 CORO1CQ9ULV4 474 aaPredicted RBP16.25■□□□□ 0.19
XRCC1-201ENST00000262887 ATAD5Q96QE3 1844 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 GOLGA6L10A0A0M3HER8 536 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
XRCC1-201ENST00000262887 SNUPNO95149 360 aaKnown RBP16.25■□□□□ 0.19
XRCC1-201ENST00000262887 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 SLFN11Q7Z7L1 901 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 NT5DC3Q86UY8 548 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
XRCC1-201ENST00000262887 SPDYE3A6NKU9 549 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 LIN7AO14910 233 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-201ENST00000262887 TDP2O95551 362 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 H2AFZP0C0S5 128 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 UCHL3P15374 230 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 SLC9A1P19634 815 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 ZNF131P52739 623 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 IFI35P80217 286 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-201ENST00000262887 ADAM9Q13443 819 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 C12orf60Q5U649 245 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 H2AFVQ71UI9 128 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 PARD3BQ8TEW8 1205 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 PRCCQ92733 491 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-201ENST00000262887 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 BMP2KQ9NSY1 1161 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-201ENST00000262887 IRAK4Q9NWZ3 460 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 COL4A1P02462 1669 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 IFNAR2P48551 515 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 DR1Q01658 176 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 PRPF4BQ13523 1007 aaKnown RBP16.24■□□□□ 0.19
XRCC1-201ENST00000262887 SEPT2Q15019 361 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 ZNF444Q8N0Y2 327 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms