RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SIGLEC10Q96LC7 697 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 NOX5Q96PH1 765 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 SEMA4AQ9H3S1 761 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 KCND1Q9NSA2 647 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 TRHDEQ9UKU6 1024 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 UBA6A0AVT1 1052 aaPredicted RBP6.09□□□□□ -1.43
CCDC54-201ENST00000261058 PRAMEF22A3QJZ6 481 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 LCHNA4D1U4 455 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 FZD9O00144 591 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 ELL2O00472 640 aaPredicted RBP6.09□□□□□ -1.43
CCDC54-201ENST00000261058 KDM1AO60341 852 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
CCDC54-201ENST00000261058 MYBPC3Q14896 1274 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 TTC38Q5R3I4 469 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 PRR31Q5SQ13 230 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 PRAMEF18Q5VWM3 479 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 KANK2Q63ZY3 851 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 TMC5Q6UXY8 1006 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 KYQ8NBH2 561 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 KCNN1Q92952 543 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 FAM84AQ96KN4 292 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 BTBD2Q9BX70 525 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 CCDC8Q9H0W5 538 aaPredicted RBP6.09□□□□□ -1.43
CCDC54-201ENST00000261058 UCKL1Q9NWZ5 548 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 MSRAQ9UJ68 235 aa6.09□□□□□ -1.43
CCDC54-201ENST00000261058 TRIM75PA6NK02 468 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 CHGBP05060 677 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 COL6A1P12109 1028 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 LIMS1P48059 325 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 MANFP55145 182 aaKnown RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 KRT85P78386 507 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 DLX2Q07687 328 aaPredicted RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 ITKQ08881 620 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 KLF1Q13351 362 aaPredicted RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 RGL3Q3MIN7 710 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 CXorf67Q86X51 503 aaPredicted RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 FAM129CQ86XR2 697 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 CMIPQ8IY22 773 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 TTLL6Q8N841 843 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 C7orf31Q8N865 590 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 MTMR8Q96EF0 704 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 WRNIP1Q96S55 665 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 WNT8AQ9H1J5 351 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 CD320Q9NPF0 282 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 C14orf119Q9NWQ9 140 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 TMPRSS11EQ9UL52 423 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 FAN1Q9Y2M0 1017 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 THRAP3Q9Y2W1 955 aaKnown RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 NOC2LQ9Y3T9 749 aaKnown RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 PRPF6O94906 941 aaKnown RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 FBXO21O94952 628 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 ECE1P42892 770 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 GPR3P46089 330 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 SLC6A3Q01959 620 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 ROM1Q03395 351 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 ZBTB41Q5SVQ8 909 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 LRSAM1Q6UWE0 723 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 SYDE1Q6ZW31 735 aaPredicted RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 POU5F2Q8N7G0 328 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 FNIP1Q8TF40 1166 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 ACAP3Q96P50 834 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 POFUT1Q9H488 388 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 METTL14Q9HCE5 456 aaKnown RBP6.08□□□□□ -1.44
CCDC54-201ENST00000261058 ARHGAP20Q9P2F6 1191 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
CCDC54-201ENST00000261058 TNKSO95271 1327 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 FARP2O94887 1054 aaPredicted RBP6.07□□□□□ -1.44
CCDC54-201ENST00000261058 TSPAN15O95858 294 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 RGS3P49796 1198 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 IL13RA1P78552 427 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 SSPNQ14714 243 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 FSCN1Q16658 493 aaKnown RBP6.07□□□□□ -1.44
CCDC54-201ENST00000261058 SLFN12LQ6IEE8 588 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 KIAA1841Q6NSI8 718 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 ESPNLQ6ZVH7 1005 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 CXXC5Q7LFL8 322 aaKnown RBP6.07□□□□□ -1.44
CCDC54-201ENST00000261058 CALML6Q8TD86 181 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 ERCC4Q92889 916 aaPredicted RBP6.07□□□□□ -1.44
CCDC54-201ENST00000261058 CLIC6Q96NY7 704 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 MYL10Q9BUA6 226 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 SLC13A1Q9BZW2 595 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 PITHD1Q9GZP4 211 aaPredicted RBP6.07□□□□□ -1.44
CCDC54-201ENST00000261058 HAPLN2Q9GZV7 340 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 OR10A5Q9H207 317 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 SPATA6Q9NWH7 488 aaPredicted RBP6.07□□□□□ -1.44
CCDC54-201ENST00000261058 ZFP69BQ9UJL9 534 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 DENND2AQ9ULE3 1009 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 PPP2R3BQ9Y5P8 575 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 IRAK3Q9Y616 596 aa6.07□□□□□ -1.44
CCDC54-201ENST00000261058 KNG1P01042 644 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 ENPP1P22413 925 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 IARSP41252 1262 aaKnown RBP6.06□□□□□ -1.44
CCDC54-201ENST00000261058 NEK2P51955 445 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 MCL1Q07820 350 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 ODR4Q5SWX8 454 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 OGFOD2Q6N063 350 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 UNQ6494/PRO21346Q6UXR6 183 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms